RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 ADAP2Q9NPF8 381 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 KCNJ16Q9NPI9 418 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 TIMMDC1Q9NPL8 285 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 TEX10Q9NXF1 929 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 SLC17A7Q9P2U7 560 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 GRID1Q9ULK0 1009 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 MRPS33Q9Y291 106 aaKnown RBP7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 PLLPQ9Y342 182 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 L3MBTL1Q9Y468 752 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 ARID1AO14497 2285 aa7.32□□□□□ -1.24
CDC42BPA-210ENST00000462553 A0A0G2JNJ9 132 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 A0A1B0GVC2 190 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 A0A1W2PR48 441 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 A0A1W2PS29 197 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 WASHC1A8K0Z3 465 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 NPIPA2E9PIF3 369 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 NPIPA3F8WFD2 350 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 G3V3Y1 287 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 MANBAO00462 879 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 PROM1O43490 865 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 SPAG7O75391 227 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 AIFM1O95831 613 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 GBAP04062 536 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 CELA3AP09093 270 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 FAM58BPP0C7Q3 252 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 ENDOUP21128 410 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 CPN2P22792 545 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 ACVR2AP27037 513 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 ADH7P40394 386 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 SOX3P41225 446 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 CCT5P48643 541 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 HK2P52789 917 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 PKNOX1P55347 436 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 PPIAP62937 165 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 SLC13A2Q13183 592 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 RCN2Q14257 317 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 ELAVL1Q15717 326 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 SGO1Q5FBB7 561 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 TNFAIP8L3Q5GJ75 292 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 LIPMQ5VYY2 423 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 DGAT2L6Q6ZPD8 337 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 COMMD6Q7Z4G1 85 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 GPR180Q86V85 440 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 NUDT13Q86X67 352 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 LIX1LQ8IVB5 337 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 C10orf107Q8IVU9 208 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 GPALPP1Q8IXQ4 340 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 MMP21Q8N119 569 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 TMEM251Q8N6I4 163 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 ARMC2Q8NEN0 867 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR5M9Q8NGP3 310 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR5M3Q8NGP4 307 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 RDH11Q8TC12 318 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 PTPMT1Q8WUK0 201 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 SELENOMQ8WWX9 145 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 SREK1Q8WXA9 508 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 C11orf24Q96F05 449 aaPredicted RBP7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 RASL10BQ96S79 203 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 FOXC2Q99958 501 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 CENPKQ9BS16 269 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 TTYH2Q9BSA4 534 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 MECRQ9BV79 373 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 ACPTQ9BZG2 426 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 LIME1Q9H400 295 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 ELOVL6Q9H5J4 265 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 BRF2Q9HAW0 419 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 PNO1Q9NRX1 252 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 OXSMQ9NWU1 459 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 LYARQ9NX58 379 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 MYOTQ9UBF9 498 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 VTI1BQ9UEU0 232 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 Q9UFV3 132 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 PHF11Q9UIL8 331 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 ADAM29Q9UKF5 820 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 SLC12A4Q9UP95 1085 aa7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 YARS2Q9Y2Z4 477 aaKnown RBP7.31□□□□□ -1.24
CDC42BPA-210ENST00000462553 ATRQ13535 2644 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 SERTM1A2A2V5 107 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 FAM221AA4D161 298 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 OR14I1A6ND48 311 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 SYNDIG1LA6NDD5 238 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 A8MVJ9 347 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 RNF223E7ERA6 249 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CLDN4O14493 209 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 PGRMC2O15173 223 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 TYROBPO43914 113 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CTAG2O75638 210 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ESRRBO95718 433 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CLPSP04118 112 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ENO1P06733 434 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 KLK1P06870 262 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 GLI4P10075 376 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 NR2F6P10588 404 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 HSD3B1P14060 373 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 CPA3P15088 417 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 HSD3B2P26439 372 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ARRB2P32121 409 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 DEKP35659 375 aaKnown RBP7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 ETV4P43268 484 aa7.3□□□□□ -1.24
CDC42BPA-210ENST00000462553 MAGEA5P43359 124 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms