RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 RAB17Q9H0T7 212 aa14.74□□□□□ -0.05
COL7A1-204ENST00000462475 OR10A5Q9H207 317 aa14.74□□□□□ -0.05
COL7A1-204ENST00000462475 NOL11Q9H8H0 719 aaKnown RBP14.74□□□□□ -0.05
COL7A1-204ENST00000462475 RASSF1Q9NS23 344 aa14.74□□□□□ -0.05
COL7A1-204ENST00000462475 PSD3Q9NYI0 1048 aa14.74□□□□□ -0.05
COL7A1-204ENST00000462475 ST6GALNAC2Q9UJ37 374 aa14.74□□□□□ -0.05
COL7A1-204ENST00000462475 C15orf41Q9Y2V0 281 aa14.74□□□□□ -0.05
COL7A1-204ENST00000462475 SLC6A5Q9Y345 797 aa14.74□□□□□ -0.05
COL7A1-204ENST00000462475 PRRC2AP48634 2157 aaKnown RBP14.73□□□□□ -0.05
COL7A1-204ENST00000462475 ESYT3A0FGR9 886 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 FAM221AA4D161 298 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 CAPN14A8MX76 684 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 AHRRA9YTQ3 701 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 CLDN9O95484 217 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 ACSL3O95573 720 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 EPPINO95925 133 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 HPNP05981 417 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 CD99P14209 185 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 PIK3R1P27986 724 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 ARL1P40616 181 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-204ENST00000462475 MASP1P48740 699 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 SERPINB8P50452 374 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 ZNF136P52737 540 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 CEBPEQ15744 281 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 UAP1Q16222 522 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-204ENST00000462475 FLYWCH1Q4VC44 716 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 TECRLQ5HYJ1 363 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 DCST1Q5T197 706 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 KLC3Q6P597 504 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 LACC1Q8IV20 430 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 PTGR2Q8N8N7 351 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-204ENST00000462475 RNASE6Q93091 150 aaKnown RBP14.73□□□□□ -0.05
COL7A1-204ENST00000462475 RMND5BQ96G75 393 aaPredicted RBP14.73□□□□□ -0.05
COL7A1-204ENST00000462475 GNRHR2Q96P88 292 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 SERPINI1Q99574 410 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 ANGPTL4Q9BY76 406 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 PRDM14Q9GZV8 571 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 CAMK2AQ9UQM7 478 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 DTX4Q9Y2E6 619 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 PLEKHA6Q9Y2H5 1048 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 TNPO3Q9Y5L0 923 aaKnown RBP14.73□□□□□ -0.05
COL7A1-204ENST00000462475 IKBKGQ9Y6K9 419 aa14.73□□□□□ -0.05
COL7A1-204ENST00000462475 A6NNC1 897 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 SNX4O95219 450 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 KLK1P06870 262 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 NT5EP21589 574 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 TIMP3P35625 211 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 PEX19P40855 299 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 CASP3P42574 277 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 TMED10P49755 219 aaKnown RBP14.72□□□□□ -0.05
COL7A1-204ENST00000462475 XKP51811 444 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 TRAF3Q13114 568 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 NNATQ16517 81 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 FBXL19-AS1Q494R0 122 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 EIPR1Q53HC9 387 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 FRG2Q64ET8 278 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 CDC20BQ86Y33 519 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 PLD6Q8N2A8 252 aaKnown RBP14.72□□□□□ -0.05
COL7A1-204ENST00000462475 OR4K14Q8NGD5 310 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 ATP6V1E2Q96A05 226 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 PHF21BQ96EK2 531 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 POM121Q96HA1 1249 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 NSUN5Q96P11 429 aaKnown RBP14.72□□□□□ -0.05
COL7A1-204ENST00000462475 FRG2BQ96QU4 278 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 SECISBP2Q96T21 854 aaKnown RBP14.72□□□□□ -0.05
COL7A1-204ENST00000462475 UGT2B28Q9BY64 529 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 MRPL1Q9BYD6 325 aaKnown RBP14.72□□□□□ -0.05
COL7A1-204ENST00000462475 NXF5Q9H1B4 397 aaKnown RBP14.72□□□□□ -0.05
COL7A1-204ENST00000462475 VPS11Q9H270 941 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 CBLCQ9ULV8 474 aa14.72□□□□□ -0.05
COL7A1-204ENST00000462475 ARHGAP21Q5T5U3 1957 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 NINQ8N4C6 2090 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 GNB5O14775 395 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 CPMP14384 443 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 BMP7P18075 431 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 S1PR1P21453 382 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 GPX3P22352 226 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 TACR1P25103 407 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 ABCD3P28288 659 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 TYK2P29597 1187 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 CCNG1P51959 295 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 NRG3P56975 720 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 TOMM20Q15388 145 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 NHSL2Q5HYW2 709 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 WIPI1Q5MNZ9 446 aaPredicted RBP14.71□□□□□ -0.05
COL7A1-204ENST00000462475 FAM219BQ5XKK7 198 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 NSUN5P2Q63ZY6 315 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 VASNQ6EMK4 673 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 DESI1Q6ICB0 168 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 METTL2BQ6P1Q9 378 aaKnown RBP14.71□□□□□ -0.05
COL7A1-204ENST00000462475 PACS2Q86VP3 889 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 TGIF2LYQ8IUE0 185 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 PM20D2Q8IYS1 436 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 MMP21Q8N119 569 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 FAM222BQ8WU58 562 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 NTNG2Q96CW9 530 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 HSPBAP1Q96EW2 488 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 TMEM41AQ96HV5 264 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 TRIB1Q96RU8 372 aa14.71□□□□□ -0.05
COL7A1-204ENST00000462475 ZBTB26Q9HCK0 441 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms