RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 HNRNPRO43390 633 aaKnown RBP12.18□□□□□ -0.46
C9orf3-210ENST00000462125 GLRA3O75311 464 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 ESRRBO95718 433 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 ATP1B1P05026 303 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 ENO1P06733 434 aaKnown RBP12.18□□□□□ -0.46
C9orf3-210ENST00000462125 CT62P0C5K7 136 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 CPMP14384 443 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 CSNK2A2P19784 350 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-210ENST00000462125 SERPINB3P29508 390 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 SSTR4P31391 388 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 CRHR1P34998 444 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 CCT5P48643 541 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 NR0B1P51843 470 aaKnown RBP12.18□□□□□ -0.46
C9orf3-210ENST00000462125 NAA20P61599 178 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 PLGLB1Q02325 96 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 MGAT2Q10469 447 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 NTRK2Q16620 822 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 PRICKLE4Q2TBC4 344 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 TCHHL1Q5QJ38 904 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-210ENST00000462125 FAM219BQ5XKK7 198 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 ZYG11AQ6WRX3 759 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 FAM47EQ6ZV65 393 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 GALNT12Q8IXK2 581 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 EID3Q8N140 333 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 TMEM251Q8N6I4 163 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 C1orf52Q8N6N3 182 aaKnown RBP12.18□□□□□ -0.46
C9orf3-210ENST00000462125 C17orf47Q8NEP4 570 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 ADIPOR1Q96A54 375 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 CTHRC1Q96CG8 243 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 ZNF681Q96N22 645 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 HBEGFQ99075 208 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 OR10A5Q9H207 317 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 CHST11Q9NPF2 352 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 SIRT5Q9NXA8 310 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 TUBA8Q9NY65 449 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-210ENST00000462125 MCM8Q9UJA3 840 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 ADAM21Q9UKJ8 722 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 GRID1Q9ULK0 1009 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 CHCHD2Q9Y6H1 151 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-210ENST00000462125 CACNA1DQ01668 2161 aa12.18□□□□□ -0.46
C9orf3-210ENST00000462125 NCOA6Q14686 2063 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-210ENST00000462125 ANKRD33BA6NCL7 494 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 OR14I1A6ND48 311 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 FOXO6A8MYZ6 492 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 G3V3Y1 287 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 UBFD1O14562 309 aaKnown RBP12.17□□□□□ -0.46
C9orf3-210ENST00000462125 CDC40O60508 579 aaKnown RBP eCLIP12.17□□□□□ -0.46
C9orf3-210ENST00000462125 PDE9AO76083 593 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 PROCP04070 461 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 CHN1P15882 459 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 NT5EP21589 574 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 HTR1EP28566 365 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 GRNP28799 593 aaKnown RBP12.17□□□□□ -0.46
C9orf3-210ENST00000462125 SOX18P35713 384 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 PIGAP37287 484 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 DNASE1L1P49184 302 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 DNAJB13P59910 316 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 RAE1P78406 368 aaKnown RBP12.17□□□□□ -0.46
C9orf3-210ENST00000462125 ZNF844Q08AG5 666 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 SLC10A1Q14973 349 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 KRT71Q3SY84 523 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 CCDC153Q494R4 210 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 EMC4Q5J8M3 183 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 GALNT18Q6P9A2 607 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 TICAM1Q8IUC6 712 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 TAGAPQ8N103 731 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 FBXW8Q8N3Y1 598 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 FAM109AQ8N4B1 249 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 NTNG2Q96CW9 530 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 PGM2Q96G03 612 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 GAL3ST4Q96RP7 486 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 FAIM2Q9BWQ8 316 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 ACPTQ9BZG2 426 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 CNOT11Q9UKZ1 510 aaKnown RBP12.17□□□□□ -0.46
C9orf3-210ENST00000462125 NPFFR2Q9Y5X5 522 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.17□□□□□ -0.46
C9orf3-210ENST00000462125 NOTCH2Q04721 2471 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 ITPR2Q14571 2701 aa12.17□□□□□ -0.46
C9orf3-210ENST00000462125 CENPEQ02224 2701 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 FAM166BA8MTA8 275 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 CAPN14A8MX76 684 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 SUSD5O60279 629 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 PLIN3O60664 434 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 TPOP07202 933 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 MYL2P10916 166 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 DRD2P14416 443 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 HMOX2P30519 316 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 FEN1P39748 380 aaKnown RBP12.16□□□□□ -0.46
C9orf3-210ENST00000462125 MAGEA5P43359 124 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 SLCO1A2P46721 670 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 HTR6P50406 440 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 SLC18A2Q05940 514 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 CDSNQ15517 529 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 GXYLT1Q4G148 440 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 TBCELQ5QJ74 424 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 TRILQ7L0X0 811 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 MMP21Q8N119 569 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 RIBC1Q8N443 379 aaPredicted RBP12.16□□□□□ -0.46
C9orf3-210ENST00000462125 OR10G3Q8NGC4 313 aa12.16□□□□□ -0.46
C9orf3-210ENST00000462125 RDH11Q8TC12 318 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms