RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ANKRD42Q8N9B4 389 aa17.27■□□□□ 0.36
USP39-209ENST00000458268 CLHC1Q8NHS4 586 aa17.27■□□□□ 0.36
USP39-209ENST00000458268 TWIST2Q8WVJ9 160 aa17.27■□□□□ 0.36
USP39-209ENST00000458268 KAT2AQ92830 837 aa17.27■□□□□ 0.36
USP39-209ENST00000458268 CNRIP1Q96F85 164 aaPredicted RBP17.27■□□□□ 0.36
USP39-209ENST00000458268 ANKRA2Q9H9E1 313 aa17.27■□□□□ 0.36
USP39-209ENST00000458268 LRTM1Q9HBL6 345 aa17.27■□□□□ 0.36
USP39-209ENST00000458268 SACM1LQ9NTJ5 587 aa17.27■□□□□ 0.36
USP39-209ENST00000458268 DEPPQ9NTK1 212 aa17.27■□□□□ 0.36
USP39-209ENST00000458268 MAT2BQ9NZL9 334 aa17.27■□□□□ 0.36
USP39-209ENST00000458268 RELNP78509 3460 aa17.27■□□□□ 0.35
USP39-209ENST00000458268 PINLYPA6NC86 204 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 OR6C76A6NM76 312 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 PDE9AO76083 593 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 NADKO95544 446 aaPredicted RBP17.26■□□□□ 0.35
USP39-209ENST00000458268 HSPA4LO95757 839 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 PCSK2P16519 638 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 GALNSP34059 522 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 SERPINB4P48594 390 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 MPEG1Q2M385 716 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 PRICKLE4Q2TBC4 344 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 KANK2Q63ZY3 851 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 NOXRED1Q6NXP6 359 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 TRIM46Q7Z4K8 759 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 TICAM1Q8IUC6 712 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 TAGAPQ8N103 731 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 SIMC1Q8NDZ2 872 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 OR9A2Q8NGT5 310 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 OR2T11Q8NH01 316 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 GPR137Q96N19 417 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 GIMAP2Q9UG22 337 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 DTX4Q9Y2E6 619 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 TRAF6Q9Y4K3 522 aa17.26■□□□□ 0.35
USP39-209ENST00000458268 SERTM1A2A2V5 107 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 CLEC18AA5D8T8 446 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 CDK2AP1O14519 115 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 PIP5K1BO14986 540 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 AKAP10O43572 662 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 LYPLA1O75608 230 aaPredicted RBP17.25■□□□□ 0.35
USP39-209ENST00000458268 ABOP16442 354 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 PIGAP37287 484 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 CHI3L2Q15782 390 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 TRMT12Q53H54 448 aaKnown RBP17.25■□□□□ 0.35
USP39-209ENST00000458268 CLEC18BQ6UXF7 455 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 CLEC18CQ8NCF0 446 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 OR2M7Q8NG81 312 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 OR52R1Q8NGF1 315 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 C16orf52Q8NHV5 167 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 MGARPQ8TDB4 240 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 SPACA9Q96E40 222 aaPredicted RBP17.25■□□□□ 0.35
USP39-209ENST00000458268 JSRP1Q96MG2 331 aaPredicted RBP17.25■□□□□ 0.35
USP39-209ENST00000458268 ITPAQ9BY32 194 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 DEFB127Q9H1M4 99 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 TUBB1Q9H4B7 451 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 SLC35C2Q9NQQ7 365 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 C1orf109Q9NX04 203 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 DNAJC15Q9Y5T4 150 aa17.25■□□□□ 0.35
USP39-209ENST00000458268 DIDO1Q9BTC0 2240 aaKnown RBP17.25■□□□□ 0.35
USP39-209ENST00000458268 ACOT7O00154 380 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 ASNA1O43681 348 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 NME6O75414 186 aaPredicted RBP17.24■□□□□ 0.35
USP39-209ENST00000458268 ATP1B1P05026 303 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 JUNP05412 331 aaKnown RBP17.24■□□□□ 0.35
USP39-209ENST00000458268 NCBP2P52298 156 aaKnown RBP eCLIP17.24■□□□□ 0.353e-6■■□□□ 12.2
USP39-209ENST00000458268 CASP6P55212 293 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 NRG3P56975 720 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 KCNJ2P63252 427 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 FUT7Q11130 342 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 C4orf17Q53FE4 359 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 ANKRD26P1Q6NSI1 321 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 GALNT18Q6P9A2 607 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 GK5Q6ZS86 529 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 FAM9CQ8IZT9 166 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 CLYBLQ8N0X4 340 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 ZNF615Q8N8J6 731 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 POGLUT1Q8NBL1 392 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 OR7G1Q8NGA0 311 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 OR10G3Q8NGC4 313 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 EGLN2Q96KS0 407 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 PPP1R36Q96LQ0 422 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 TSSK3Q96PN8 268 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 MYNNQ9NPC7 610 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 LRRK2Q5S007 2527 aa17.24■□□□□ 0.35
USP39-209ENST00000458268 EXPH5Q8NEV8 1989 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 ATP6AP2A0A1C7CYW4 349 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 SLC19A2O60779 497 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 ATP6AP2O75787 350 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 DDCP20711 480 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 CNR1P21554 472 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 GPX3P22352 226 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 TACR1P25103 407 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 NTSP30990 170 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 ARRB2P32121 409 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 ETV4P43268 484 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 FBXW4P57775 412 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 PPIAP62937 165 aaKnown RBP17.23■□□□□ 0.35
USP39-209ENST00000458268 MAP4K2Q12851 820 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 SLC22A10Q63ZE4 541 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 LRIG3Q6UXM1 1119 aa17.23■□□□□ 0.35
USP39-209ENST00000458268 CROCCP2Q86T23 111 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms