RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 DDCP20711 480 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 SCN1BQ07699 218 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 DPPA4Q7L190 304 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 TRIM69Q86WT6 500 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 TRMT61BQ9BVS5 477 aaKnown RBP18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 ZDHHC5Q9C0B5 715 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 XKR8Q9H6D3 395 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 C3orf14Q9HBI5 128 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 NDUFB11Q9NX14 153 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 SLC23A2Q9UGH3 650 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 NOTCH4Q99466 2003 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 A0A0B4J293 547 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 OR1F1O43749 312 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 Q5BKY6 102 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 PLA2G15Q8NCC3 412 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 SMPDL3AQ92484 453 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 RNF31Q96EP0 1072 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 OR2B2Q9GZK3 357 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 HCN2Q9UL51 889 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 MGAT4BQ9UQ53 548 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 NTNG1Q9Y2I2 539 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 A0A1B0GVC2 190 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 A6NIN4 97 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 QSOX1O00391 747 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 DVL2O14641 736 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 HOXD10P28358 340 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 LASP1Q14847 261 aaKnown RBP18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 P2RY14Q15391 338 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 LAPTM4BQ86VI4 370 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 C12orf40Q86WS4 652 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 DOK4Q8TEW6 326 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 ARSGQ96EG1 525 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 NEURL3Q96EH8 262 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 A4GNTQ9UNA3 340 aa18.51■□□□□ 0.55
CNEP1R1-203ENST00000458059 FGF18O76093 207 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 PSKH1P11801 424 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 MYL12AP19105 171 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 RPL3P39023 403 aaKnown RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 MAN2A2P49641 1150 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 WDR5P61964 334 aaKnown RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 SNRPD2P62316 118 aaKnown RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 KHDRBS2Q5VWX1 349 aaKnown RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 SAXO2Q658L1 398 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 C17orf64Q86WR6 236 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 LRRC56Q8IYG6 542 aaPredicted RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 ENKURQ8TC29 256 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 ZNF354BQ96LW1 612 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 ZNF582Q96NG8 517 aaPredicted RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 SIRT3Q9NTG7 399 aaPredicted RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 PLEKHB1Q9UF11 243 aaPredicted RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 NDRG2Q9UN36 371 aaKnown RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 HIDE1A8MVS5 230 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 FAAHO00519 579 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 TP53P04637 393 aaPredicted RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 HOXB3P14651 431 aaPredicted RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 MYL9P24844 172 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 KCNJ5P48544 419 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 SNRPGP62308 76 aaKnown RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 C12orf73Q69YU5 71 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 CREB3L4Q8TEY5 395 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 ZG16BQ96DA0 208 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 NUS1Q96E22 293 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 DTD2Q96FN9 168 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 ZNF717Q9BY31 904 aaPredicted RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 FBXW2Q9UKT8 454 aa18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 MN1Q10571 1320 aaPredicted RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 KIAA0100Q14667 2235 aaKnown RBP18.5■□□□□ 0.55
CNEP1R1-203ENST00000458059 C2orf92A0A1B0GVN3 265 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 CASKO14936 926 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 CPNE3O75131 537 aaKnown RBP18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 C6P13671 934 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 KIR2DL3P43628 341 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 GIPRP48546 466 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 NCF4Q15080 339 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 GPAT3Q53EU6 434 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 KIAA1161Q6NSJ0 714 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 OR4F15Q8NGB8 312 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 TFGQ92734 400 aaPredicted RBP18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 SLC25A46Q96AG3 418 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 RNFT2Q96EX2 444 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 OR6C70A6NIJ9 312 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 HPGDSO60760 199 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 LILRB5O75023 590 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 ZNF791Q3KP31 576 aaPredicted RBP18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 PLPP4Q5VZY2 271 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 SLC30A8Q8IWU4 369 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 KRT78Q8N1N4 520 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 PROKR2Q8NFJ6 384 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 C16orf58Q96GQ5 468 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 OSGEPL1Q9H4B0 414 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 SNX7Q9UNH6 387 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 PCDHGB2Q9Y5G2 931 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 KCNE3Q9Y6H6 103 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 DENND4CQ5VZ89 1909 aa18.49■□□□□ 0.55
CNEP1R1-203ENST00000458059 CPSF4LA6NMK7 179 aaKnown RBP18.48■□□□□ 0.55
CNEP1R1-203ENST00000458059 RAB36O95755 333 aa18.48■□□□□ 0.55
CNEP1R1-203ENST00000458059 LALBAP00709 142 aa18.48■□□□□ 0.55
CNEP1R1-203ENST00000458059 PIPP12273 146 aaPredicted RBP18.48■□□□□ 0.55
CNEP1R1-203ENST00000458059 TEKQ02763 1124 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms