RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 LRFN1Q9P244 771 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 BCAP29Q9UHQ4 241 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 ENTPD4Q9Y227 616 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 COL6A6A6NMZ7 2263 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 MGAQ8IWI9 3026 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 ZZEF1O43149 2961 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 DSPP15924 2871 aaKnown RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 UQCRHLA0A096LP55 91 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 TMEM200CA6NKL6 621 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 HMGB1P1B2RPK0 211 aaPredicted RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 PRAMEF2O60811 474 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 OR2J2O76002 312 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 SNUPNO95149 360 aaKnown RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 IGKV3-11P04433 115 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 JUNP05412 331 aaKnown RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 KITP10721 976 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 SDC1P18827 310 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 DDCP20711 480 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 CYB561P49447 251 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 SSR4P51571 173 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 OR1C1Q15619 314 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 LTB4RQ15722 352 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 IGFBP7Q16270 282 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 PRICKLE4Q2TBC4 344 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 XKR7Q5GH72 579 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 ZNF766Q5HY98 468 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 C6orf136Q5SQH8 315 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 SLC25A25Q6KCM7 469 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 IL20RBQ6UXL0 311 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 SLC29A4Q7RTT9 530 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 C9orf40Q8IXQ3 194 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 LRRC25Q8N386 305 aaPredicted RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 LIX1Q8N485 282 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 FNDC5Q8NAU1 212 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 OR8K3Q8NH51 312 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.35□□□□□ -0.91
RFX3-210ENST00000457373 SNRNP40Q96DI7 357 aaKnown RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 C19orf60Q96EN9 201 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 FBXL20Q96IG2 436 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 FCRL1Q96LA6 429 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 ZNF681Q96N22 645 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 BBS4Q96RK4 519 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 GAL3ST4Q96RP7 486 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 CCT7Q99832 543 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 HES7Q9BYE0 225 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 NUF2Q9BZD4 464 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 OR10A5Q9H207 317 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 SLC35C2Q9NQQ7 365 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 ASF1BQ9NVP2 202 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.35□□□□□ -0.91
RFX3-210ENST00000457373 THAP1Q9NVV9 213 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 MAT2BQ9NZL9 334 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 MYOTQ9UBF9 498 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 EXO1Q9UQ84 846 aaKnown RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 ERVK-11Q9UQG0 969 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 WBP11Q9Y2W2 641 aaKnown RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 YARS2Q9Y2Z4 477 aaKnown RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 TMED5Q9Y3A6 229 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 COPG1Q9Y678 874 aaKnown RBP9.35□□□□□ -0.91
RFX3-210ENST00000457373 EML6Q6ZMW3 1958 aa9.35□□□□□ -0.91
RFX3-210ENST00000457373 C2orf92A0A1B0GVN3 265 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 A8MVJ9 347 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 J3QKU1 62 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 CLPSP04118 112 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 ATP1B1P05026 303 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 SP1P08047 785 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 BCKDHAP12694 445 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 MPIP34949 423 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 HLCSP50747 726 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 SLC37A1P57057 533 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 PPP2R2AP63151 447 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 MRPS35P82673 323 aaKnown RBP9.34□□□□□ -0.91
RFX3-210ENST00000457373 SRSF11Q05519 484 aaKnown RBP9.34□□□□□ -0.91
RFX3-210ENST00000457373 MGAT2Q10469 447 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 FUT7Q11130 342 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 MAP4K2Q12851 820 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 EXOSC7Q15024 291 aaKnown RBP9.34□□□□□ -0.91
RFX3-210ENST00000457373 MAPKAPK3Q16644 382 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 TRMT12Q53H54 448 aaKnown RBP9.34□□□□□ -0.91
RFX3-210ENST00000457373 IL23RQ5VWK5 629 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 HLA-DQA1Q5Y7H0 255 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 ANKRD26P1Q6NSI1 321 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 IKBIPQ70UQ0 350 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 GALNTL5Q7Z4T8 443 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 SAMD14Q8IZD0 417 aaPredicted RBP9.34□□□□□ -0.91
RFX3-210ENST00000457373 FAM9CQ8IZT9 166 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 KIRREL3Q8IZU9 778 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 HORMAD2Q8N7B1 307 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 MDS2Q8NDY4 140 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 SIMC1Q8NDZ2 872 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 OR9A2Q8NGT5 310 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 RAB3IL1Q8TBN0 382 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 DYDC1Q8WWB3 177 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 ASB15Q8WXK1 588 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 ZNF75CPQ92670 426 aaPredicted RBP9.34□□□□□ -0.91
RFX3-210ENST00000457373 KAT2AQ92830 837 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 C5orf34Q96MH7 638 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 RASL10BQ96S79 203 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 GRIP2Q9C0E4 1043 aa9.34□□□□□ -0.91
RFX3-210ENST00000457373 REEP4Q9H6H4 257 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms