RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PAIP2Q9BPZ3 127 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 SLC35C2Q9NQQ7 365 aa16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 RYDENQ9NUL5 291 aaKnown RBP16.71■□□□□ 0.27
PDLIM2-215ENST00000456545 ZGRF1Q86YA3 2104 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 SVILO95425 2214 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 PRRC2CQ9Y520 2896 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 TRGV8A0A0C4DH27 118 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 A0A1B0GUH1 482 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 CLEC18AA5D8T8 446 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 G3V3Y1 287 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 BCAS2O75934 225 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 ZWINTO95229 277 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 HSPA4LO95757 839 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 DDCP20711 480 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 PTGER1P34995 402 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 SERPINB4P48594 390 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 EXOSC7Q15024 291 aaKnown RBP16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 GALNTL6Q49A17 601 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 C4orf17Q53FE4 359 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 CLEC18BQ6UXF7 455 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 GK5Q6ZS86 529 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 TICAM1Q8IUC6 712 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 ZNF615Q8N8J6 731 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 CLEC18CQ8NCF0 446 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 OR5M3Q8NGP4 307 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 SPACA9Q96E40 222 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 C11orf24Q96F05 449 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 PGM2Q96G03 612 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 MAGED4Q96JG8 741 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 PKNOX2Q96KN3 472 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 ZNF681Q96N22 645 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 FAM173AQ9BQD7 235 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 MYNNQ9NPC7 610 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 MAT2BQ9NZL9 334 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 EHD3Q9NZN3 535 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 PRODH2Q9UF12 536 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 DNAJC15Q9Y5T4 150 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 PTGDR2Q9Y5Y4 395 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 ACTL7BQ9Y614 415 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 MYO18BQ8IUG5 2567 aa16.7■□□□□ 0.26
PDLIM2-215ENST00000456545 ACOT7O00154 380 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 TP53I11O14683 189 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 BIRC5O15392 142 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 ZNF354AO60765 605 aaPredicted RBP16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 CLPSP04118 112 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 PRPH2P23942 346 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 ETV4P43268 484 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 TMED10P49755 219 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 LTB4RQ15722 352 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 CHI3L2Q15782 390 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 TRMT12Q53H54 448 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 HHATQ5VTY9 493 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 FAM71E1Q6IPT2 247 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 Q6ZSR9 355 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 FAM9CQ8IZT9 166 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 GHDCQ8N2G8 530 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 OR2M7Q8NG81 312 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 OR52R1Q8NGF1 315 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 C16orf52Q8NHV5 167 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 SH3BGRL2Q9UJC5 107 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 ERRFI1Q9UJM3 462 aaPredicted RBP16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 NPFFR2Q9Y5X5 522 aa16.69■□□□□ 0.26
PDLIM2-215ENST00000456545 UBR5O95071 2799 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 TMEM233B4DJY2 109 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 PIP5K1BO14986 540 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 HS6ST1O60243 411 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 CDC40O60508 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 NADKO95544 446 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 STSP08842 583 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 ABOP16442 354 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 PCSK2P16519 638 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 NTSP30990 170 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 PPIAP62937 165 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 RPL38P63173 70 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 RPP38P78345 283 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 MRPS35P82673 323 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 DUSP2Q05923 314 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 MGAT2Q10469 447 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 ZNF791Q3KP31 576 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 C1QL3Q5VWW1 255 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 PAOXQ6QHF9 649 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 RNF165Q6ZSG1 346 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 IKBIPQ70UQ0 350 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 FJX1Q86VR8 437 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 ANKRD42Q8N9B4 389 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 ZFP62Q8NB50 900 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 OR9A2Q8NGT5 310 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 KAT2AQ92830 837 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 GFM2Q969S9 779 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 PPP3R2Q96LZ3 170 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 TUBB1Q9H4B7 451 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 DEPPQ9NTK1 212 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 CNIH4Q9P003 139 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 ZDHHC2Q9UIJ5 367 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 TMED5Q9Y3A6 229 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 CCL27Q9Y4X3 112 aa16.68■□□□□ 0.26
PDLIM2-215ENST00000456545 AKAP10O43572 662 aa16.67■□□□□ 0.26
PDLIM2-215ENST00000456545 PEX11AO75192 247 aa16.67■□□□□ 0.26
PDLIM2-215ENST00000456545 SERPINE1P05121 402 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms