RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CDK9P50750 372 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 PSMD4P55036 377 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ADARB1P78563 741 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 CSTF1Q05048 431 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 SHBQ15464 509 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 PRSS53Q2L4Q9 553 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 DEFB133Q30KQ1 61 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 LRRC23Q53EV4 343 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF628Q5EBL2 1059 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 FHL5Q5TD97 284 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 USP51Q70EK9 711 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC35F3Q8IY50 421 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 OR4N4Q8N0Y3 316 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF555Q8NEP9 628 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 NUP43Q8NFH3 380 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 NFKBIDQ8NI38 313 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 NUDT8Q8WV74 236 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 N4BP2L2Q92802 583 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 VPS50Q96JG6 964 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ART5Q96L15 291 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF354BQ96LW1 612 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF300Q96RE9 604 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 MAP3K3Q99759 626 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 SAP130Q9H0E3 1048 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 RAPGEFL1Q9UHV5 662 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 KCND3Q9UK17 655 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ACAD8Q9UKU7 415 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF232Q9UNY5 417 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 MAP4K5Q9Y4K4 846 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 PI4KAP42356 2102 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 REV3LO60673 3130 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 TRIM64A6NGJ6 449 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 TMX2-CTNND1H3BSU7 103 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 M0QX08 132 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 DSCR3O14972 297 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 FMO6PO60774 539 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 E2F6O75461 281 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ERAL1O75616 437 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 CD63P08962 238 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 NR2F1P10589 423 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 TYRP1P17643 537 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 CD1CP29017 333 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 MAP3K8P41279 467 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ATXN3P54252 364 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 SH3BGRP55822 239 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 HPCAP84074 193 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 DSG2Q14126 1118 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 KEAP1Q14145 624 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 IQCCQ4KMZ1 466 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 COX20Q5RI15 118 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 C18orf63Q68DL7 685 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 MFSD12Q6NUT3 480 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 FAHD1Q6P587 224 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 UGT2A3Q6UWM9 527 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ANGPTL8Q6UXH0 198 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 QSOX2Q6ZRP7 698 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 EPHX4Q8IUS5 362 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 CMIPQ8IY22 773 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 GPR135Q8IZ08 494 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 MAML2Q8IZL2 1156 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 PARP8Q8N3A8 854 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 HORMAD2Q8N7B1 307 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 AMER3Q8N944 861 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 SPPL2AQ8TCT8 520 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 PIP5K1AQ99755 562 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 LMF2Q9BU23 707 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ADI1Q9BV57 179 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 TRIM8Q9BZR9 551 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 TGIF2Q9GZN2 237 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 OR51I1Q9H343 314 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 PIF1Q9H611 641 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 KLHL28Q9NXS3 571 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 GMPR2Q9P2T1 348 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 PRODH2Q9UF12 536 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 PCDHGA8Q9Y5G5 932 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 SLCO1B1Q9Y6L6 691 aa6.42□□□□□ -1.38
ECHDC1-210ENST00000454859 ADAMTS20P59510 1910 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 H3BMH7 237 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 SOCS2O14508 198 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CHST10O43529 356 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC28A2O43868 658 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 GCM2O75603 506 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CPNE6O95741 557 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 HMGN2P05204 90 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 LYNP07948 512 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 ALOX5P09917 674 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CKMT1AP12532 417 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CD247P20963 164 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 RYKP34925 604 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 RORAP35398 523 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 XCR1P46094 333 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 STT3AP46977 705 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CXCR4P61073 352 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 DCAF7P61962 342 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 BNC1Q01954 994 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNHIT3Q15649 155 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 PRICKLE4Q2TBC4 344 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 KDM4DQ6B0I6 523 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 DBX2Q6ZNG2 339 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms