RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 LTB4RQ15722 352 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 PIGGQ5H8A4 983 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 C6orf136Q5SQH8 315 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 FHL5Q5TD97 284 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 SLC25A25Q6KCM7 469 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 FAM180AQ6UWF9 173 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 SLC29A4Q7RTT9 530 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 TICAM1Q8IUC6 712 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 LRRC34Q8IZ02 419 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 SLC15A4Q8N697 577 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 BCORP1Q8N888 145 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 TMEM178AQ8NBL3 297 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 FAR1Q8WVX9 515 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 ADIPOR1Q96A54 375 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 C5orf34Q96MH7 638 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 FRMD6Q96NE9 622 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 OR10A5Q9H207 317 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 LIN28AQ9H9Z2 209 aaKnown RBP13.11□□□□□ -0.31
HDAC4-205ENST00000454542 SH2D2AQ9NP31 389 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 MIEF1Q9NQG6 463 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 NKIRAS1Q9NYS0 192 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 GIMAP2Q9UG22 337 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 DTX4Q9Y2E6 619 aa13.11□□□□□ -0.31
HDAC4-205ENST00000454542 NBASA2RRP1 2371 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 CLEC18AA5D8T8 446 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 KLF11O14901 512 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 RASAL1O95294 804 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 BCKDHAP12694 445 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 PCSK2P16519 638 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 GPX3P22352 226 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 PTGER1P34995 402 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 FRKP42685 505 aaPredicted RBP13.1□□□□□ -0.31
HDAC4-205ENST00000454542 ASMTP46597 345 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 RPL14P50914 215 aaKnown RBP13.1□□□□□ -0.31
HDAC4-205ENST00000454542 OCRLQ01968 901 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 SMU1Q2TAY7 513 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 GALNTL6Q49A17 601 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 ATP6AP1LQ52LC2 224 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF385BQ569K4 471 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 C6orf163Q5TEZ5 329 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 CLEC18BQ6UXF7 455 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 GALNTL5Q7Z4T8 443 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 ATCAYQ86WG3 371 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 DND1Q8IYX4 353 aaKnown RBP13.1□□□□□ -0.31
HDAC4-205ENST00000454542 FAM9CQ8IZT9 166 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 TMEM156Q8N614 296 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 GOLM1Q8NBJ4 401 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 CLEC18CQ8NCF0 446 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 OR9A2Q8NGT5 310 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 DNAJB8Q8NHS0 232 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 C16orf52Q8NHV5 167 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 CDC26Q8NHZ8 85 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 SLC22A8Q8TCC7 542 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 MGARPQ8TDB4 240 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 ASB15Q8WXK1 588 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 NR4A3Q92570 626 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 TSSK3Q96PN8 268 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 BRINP2Q9C0B6 783 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 AGPAT4Q9NRZ5 378 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 GIMAP4Q9NUV9 329 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 MAP10Q9P2G4 905 aa13.1□□□□□ -0.31
HDAC4-205ENST00000454542 ATP6AP2A0A1C7CYW4 349 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 A8MVJ9 347 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 HMGB1P1B2RPK0 211 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-205ENST00000454542 TCP11X1B4DZS4 312 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 PLOD3O60568 738 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 ATP6AP2O75787 350 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 PSMG1O95456 288 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 FBXO45P0C2W1 286 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 EDN3P14138 238 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 MAPK1P28482 360 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 UQCRFS1P47985 274 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 EMDP50402 254 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 C21orf58P58505 322 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 MRPS35P82673 323 aaKnown RBP13.09□□□□□ -0.31
HDAC4-205ENST00000454542 PMP22Q01453 160 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 PDCD2Q16342 344 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-205ENST00000454542 ZNF791Q3KP31 576 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-205ENST00000454542 OPN5Q6U736 354 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 MDGA2Q7Z553 956 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 TRIM42Q8IWZ5 723 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 CCDC116Q8IYX3 515 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 ST6GALNAC3Q8NDV1 305 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 PSD4Q8NDX1 1056 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 SIMC1Q8NDZ2 872 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 ADCY4Q8NFM4 1077 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 MTERF3Q96E29 417 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 SPACA9Q96E40 222 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-205ENST00000454542 SGCZQ96LD1 299 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 GAL3ST4Q96RP7 486 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 PAIP2Q9BPZ3 127 aaKnown RBP13.09□□□□□ -0.31
HDAC4-205ENST00000454542 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 REEP4Q9H6H4 257 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 MEAF6Q9HAF1 191 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 PFDN4Q9NQP4 134 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 OLAHQ9NV23 265 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 THAP1Q9NVV9 213 aa13.09□□□□□ -0.31
HDAC4-205ENST00000454542 HPF1Q9NWY4 346 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms