RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 NLRP8Q86W28 1048 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 AMIGO1Q86WK6 493 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 LAS2Q8IYD9 372 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 OR4K5Q8NGD3 323 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 MGLLQ99685 303 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 C3orf14Q9HBI5 128 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 ACER3Q9NUN7 267 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 C14orf119Q9NWQ9 140 aa11.33□□□□□ -0.6
SMPD4-213ENST00000454468 NDRG4Q9ULP0 352 aaKnown RBP11.33□□□□□ -0.6
SMPD4-213ENST00000454468 TMEM221A6NGB7 291 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 CPNE6O95741 557 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SLC35G6P0C7Q6 338 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 RHCEP18577 417 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 MYL12AP19105 171 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 C5AR1P21730 350 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 PRPH2P23942 346 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SOX6P35712 828 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 EMP3P54852 163 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 GABARAPL2P60520 117 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 C1DQ13901 141 aaKnown RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 FXNQ16595 210 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 FRMPD2BQ6IN97 320 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 FAM92BQ6ZTR7 304 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SLC22A16Q86VW1 577 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 VRK2Q86Y07 508 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 LACC1Q8IV20 430 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SFTPA2Q8IWL1 248 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 NUP43Q8NFH3 380 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 ZG16BQ96DA0 208 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SH3YL1Q96HL8 342 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 EPYCQ99645 322 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 ALOXE3Q9BYJ1 711 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 PALMDQ9NP74 551 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 TBC1D29Q9UFV1 150 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 TCF20Q9UGU0 1960 aaKnown RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SNX4O95219 450 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 RPLP0P05388 317 aaKnown RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 NTSR1P30989 418 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 GPR4P46093 362 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 CRYBA2P53672 197 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 LIM2P55344 173 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 PRR5P85299 388 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 FGL2Q14314 439 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 FIGNL1Q6PIW4 674 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 PRSS48Q7RTY5 328 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 LHFPL3Q86UP9 236 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 PRSS58Q8IYP2 241 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 DTX3Q8N9I9 347 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 WFDC6Q9BQY6 131 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 MVB12BQ9H7P6 319 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 CLEC2DQ9UHP7 191 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 FBXO9Q9UK97 447 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 KCNE3Q9Y6H6 103 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SCN8AQ9UQD0 1980 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 LILRB5O75023 590 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 GUCY1B2O75343 617 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 ZNF888P0CJ79 500 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 BSGP35613 385 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 MAGEA2P43356 314 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SNAP47Q5SQN1 464 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 ANKRD54Q6NXT1 300 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 HSDL2Q6YN16 418 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SLC7A5P1Q8MH63 180 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 TEX47Q8TBZ9 253 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 IPCEF1Q8WWN9 437 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 TANKQ92844 425 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SLC38A4Q969I6 547 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 RERGQ96A58 199 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 MAPKAP1Q9BPZ7 522 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 TBC1D17Q9HA65 648 aa11.32□□□□□ -0.6
SMPD4-213ENST00000454468 ZFR2Q9UPR6 939 aaKnown RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 SPIN1Q9Y657 262 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-213ENST00000454468 HYAL3O43820 417 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-213ENST00000454468 NOS3P29474 1203 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 ANXA11P50995 505 aaKnown RBP11.31□□□□□ -0.6
SMPD4-213ENST00000454468 CHRNEQ04844 493 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 MLF2Q15773 248 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-213ENST00000454468 BHLHB9Q6PI77 547 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 PAQR6Q6TCH4 344 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 OOSP2Q86WS3 158 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 FAM46DQ8NEK8 389 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 OR6T1Q8NGN1 323 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 GPR151Q8TDV0 419 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 GRHL3Q8TE85 626 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 HRASLS5Q96KN8 279 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 OR2M4Q96R27 311 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 EGLN3Q9H6Z9 239 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 FAM170BA6NMN3 283 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 B4DGG1 531 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 OR10H2O60403 315 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 AIFM1O95831 613 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 ADH1BP00325 375 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 HIST1H1TP22492 207 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-213ENST00000454468 CCR4P51679 360 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 SEC23BQ15437 767 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 RPE65Q16518 533 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 TMEM52BQ4KMG9 183 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 PODNL1Q6PEZ8 512 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 ZNF793Q6ZN11 406 aa11.31□□□□□ -0.6
SMPD4-213ENST00000454468 OR2A1Q8NGT9 310 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms