RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CLIC1O00299 241 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 KLF7O75840 302 aaPredicted RBP13.67□□□□□ -0.22
TNF-208ENST00000449264 DNAJC8O75937 253 aaPredicted RBP13.67□□□□□ -0.22
TNF-208ENST00000449264 CD82P27701 267 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 DLSTP36957 453 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 STAT5AP42229 794 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 PRR5P85299 388 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 ZNF267Q14586 743 aaPredicted RBP13.67□□□□□ -0.22
TNF-208ENST00000449264 TRMT12Q53H54 448 aaKnown RBP13.67□□□□□ -0.22
TNF-208ENST00000449264 VWA5B2Q8N398 1253 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 SIMC1Q8NDZ2 872 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 OR8J3Q8NGG0 315 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 ZNF675Q8TD23 568 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 TMEM125Q96AQ2 219 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 NXPE2Q96DL1 559 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 CLPTM1LQ96KA5 538 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 CXorf21Q9HAI6 301 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 C3orf14Q9HBI5 128 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 ADAP2Q9NPF8 381 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 CMTM6Q9NX76 183 aa13.67□□□□□ -0.22
TNF-208ENST00000449264 IGHV3-20A0A0C4DH32 117 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 EVPLLA8MZ36 301 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 HRKO00198 91 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 NME4O00746 187 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 GSC2O15499 205 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 EMC8O43402 210 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 NME6O75414 186 aaPredicted RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 PDE5AO76074 875 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 UMODP07911 640 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 PGM1P36871 562 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 OR4D2P58180 307 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 RPS15P62841 145 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 RPS26P62854 115 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 BIKQ13323 160 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 DNASE1L3Q13609 305 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 EXOSC7Q15024 291 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 ELAVL1Q15717 326 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.66□□□□□ -0.22
TNF-208ENST00000449264 IGF2-ASQ6U949 168 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 TMEM64Q6YI46 380 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 ANKRD37Q7Z713 158 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 RNF130Q86XS8 419 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 SLC15A3Q8IY34 581 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 IL22RA1Q8N6P7 574 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 NUP43Q8NFH3 380 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 OR56A1Q8NGH5 318 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 FBXO30Q8TB52 745 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 SFXN5Q8TD22 340 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 C8orf44Q96CB5 159 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 SLC35G5Q96KT7 338 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 PIF1Q9H611 641 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 ERVK-19Q9WJR5 959 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 CLCA3PQ9Y6N3 262 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 FREM2Q5SZK8 3169 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 LOC101059948A0A1B0GTJ6 334 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 TRABD2BA6NFA1 517 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 UPK1AO00322 258 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 DYRK3O43781 588 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 DXOO77932 396 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 SLITRK5O94991 958 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 KRT75O95678 551 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 RAB40ALP0C0E4 278 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 SSTR4P31391 388 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 SOX18P35713 384 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 KCNJ2P63252 427 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 EEF1A2Q05639 463 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 MGAT2Q10469 447 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 LASP1Q14847 261 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 SFT2D3Q587I9 215 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 SAXO2Q658L1 398 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 C6orf120Q7Z4R8 191 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 IFNEQ86WN2 208 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 OR10A6Q8NH74 314 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 PTPMT1Q8WUK0 201 aaPredicted RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 JADE3Q92613 823 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 MOAP1Q96BY2 351 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 NEURL3Q96EH8 262 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 SH3GL1Q99961 368 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 ECSITQ9BQ95 431 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 SCNM1Q9BWG6 230 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 OR8D2Q9GZM6 311 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 PTGFRNQ9P2B2 879 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 TMEM181Q9P2C4 612 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 GMPR2Q9P2T1 348 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 ABCD2Q9UBJ2 740 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 C19orf25Q9UFG5 118 aaPredicted RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 BCAP29Q9UHQ4 241 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 TCFL5Q9UL49 500 aa13.66□□□□□ -0.22
TNF-208ENST00000449264 PRPF19Q9UMS4 504 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 FARSAQ9Y285 508 aaKnown RBP13.66□□□□□ -0.22
TNF-208ENST00000449264 CELSR3Q9NYQ7 3312 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 SYNDIG1LA6NDD5 238 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 C21orf140B9A014 251 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.65□□□□□ -0.22
TNF-208ENST00000449264 PLOD2O00469 737 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 CD63P08962 238 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 TCN1P20061 433 aaPredicted RBP13.65□□□□□ -0.22
TNF-208ENST00000449264 PPIBP23284 216 aaKnown RBP13.65□□□□□ -0.22
TNF-208ENST00000449264 SOX11P35716 441 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms