RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 A8MVJ9 347 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 PIP5K1BO14986 540 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 SEC22BO75396 215 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 SKAP2O75563 359 aaPredicted RBP13.5□□□□□ -0.25
USP39-206ENST00000448971 IGKV3-11P04433 115 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 SERPINE1P05121 402 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 LINC00032P0C843 101 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 PORP16435 677 aaPredicted RBP13.5□□□□□ -0.25
USP39-206ENST00000448971 GALNSP34059 522 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 TRHRP34981 398 aaPredicted RBP13.5□□□□□ -0.25
USP39-206ENST00000448971 FEN1P39748 380 aaKnown RBP13.5□□□□□ -0.25
USP39-206ENST00000448971 HLCSP50747 726 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 PMP22Q01453 160 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 ZNF750Q32MQ0 723 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 FAM180BQ6P0A1 224 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 GALNT18Q6P9A2 607 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 MCEMP1Q8IX19 187 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 C9orf40Q8IXQ3 194 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 CLYBLQ8N0X4 340 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 ARMC10Q8N2F6 343 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 LRRC25Q8N386 305 aaPredicted RBP13.5□□□□□ -0.25
USP39-206ENST00000448971 OR8K3Q8NH51 312 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 RELTQ969Z4 430 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 EXOSC8Q96B26 276 aaKnown RBP13.5□□□□□ -0.25
USP39-206ENST00000448971 LRTM1Q9HBL6 345 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 MIEF1Q9NQG6 463 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 HPF1Q9NWY4 346 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 C1orf109Q9NX04 203 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 HEY2Q9UBP5 337 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 YARS2Q9Y2Z4 477 aaKnown RBP13.5□□□□□ -0.25
USP39-206ENST00000448971 TRAF6Q9Y4K3 522 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 DNAJC15Q9Y5T4 150 aa13.5□□□□□ -0.25
USP39-206ENST00000448971 MTORP42345 2549 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 A0A1B0GUH1 482 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 TMEM120BA0PK00 339 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 CDK2AP1O14519 115 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 BIRC5O15392 142 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 LYPLA1O75608 230 aaPredicted RBP13.49□□□□□ -0.25
USP39-206ENST00000448971 NEURL1O76050 574 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 DRD2P14416 443 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 CSNK2A2P19784 350 aaPredicted RBP13.49□□□□□ -0.25
USP39-206ENST00000448971 SSTR4P31391 388 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 PTGER1P34995 402 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 MAPKAPK3Q16644 382 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 GALNTL6Q49A17 601 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 HHATQ5VTY9 493 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 RNF165Q6ZSG1 346 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 GALNTL5Q7Z4T8 443 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 FJX1Q86VR8 437 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 VWA5B2Q8N398 1253 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 OR2T11Q8NH01 316 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 NUBPLQ8TB37 319 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 SLC22A8Q8TCC7 542 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 MGARPQ8TDB4 240 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 SCMH1Q96GD3 660 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 RASL10BQ96S79 203 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 TUBB1Q9H4B7 451 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 CXorf21Q9HAI6 301 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 SIRT5Q9NXA8 310 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 CES1P1Q9UKY3 287 aa13.49□□□□□ -0.25
USP39-206ENST00000448971 TMEM200CA6NKL6 621 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 OR6C76A6NM76 312 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 TMEM114B3SHH9 223 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 PRSS44E7EML9 344 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 NME2P1O60361 137 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 CRYABP02511 175 aaKnown RBP13.48□□□□□ -0.25
USP39-206ENST00000448971 ATP1B1P05026 303 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 SP1P08047 785 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 CT62P0C5K7 136 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 DDCP20711 480 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 BGNP21810 368 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 NME2P22392 152 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 PRPH2P23942 346 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 GRNP28799 593 aaKnown RBP13.48□□□□□ -0.25
USP39-206ENST00000448971 ARRB2P32121 409 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 SOX3P41225 446 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 SLC37A1P57057 533 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 MAGOHP61326 146 aaKnown RBP13.48□□□□□ -0.25
USP39-206ENST00000448971 C2orf80Q0P641 193 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 EBPQ15125 230 aaKnown RBP13.48□□□□□ -0.25
USP39-206ENST00000448971 HLA-DQA1Q5Y7H0 255 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 SLC25A25Q6KCM7 469 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 NOXRED1Q6NXP6 359 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 GPALPP1Q8IXQ4 340 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 SAMD14Q8IZD0 417 aaPredicted RBP13.48□□□□□ -0.25
USP39-206ENST00000448971 FAM76AQ8TAV0 307 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 C11orf24Q96F05 449 aaPredicted RBP13.48□□□□□ -0.25
USP39-206ENST00000448971 CNRIP1Q96F85 164 aaPredicted RBP13.48□□□□□ -0.25
USP39-206ENST00000448971 TAAR6Q96RI8 345 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 WWTR1Q9GZV5 400 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 TMBIM4Q9HC24 238 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 MYNNQ9NPC7 610 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 TIMMDC1Q9NPL8 285 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 NKIRAS1Q9NYS0 192 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 KLF13Q9Y2Y9 288 aaPredicted RBP13.48□□□□□ -0.25
USP39-206ENST00000448971 CCL27Q9Y4X3 112 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 PCDHGB6Q9Y5F9 930 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 MED13LQ71F56 2210 aa13.48□□□□□ -0.25
USP39-206ENST00000448971 LSM1O15116 133 aaKnown RBP13.47□□□□□ -0.25
USP39-206ENST00000448971 OR6B1O95007 311 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms