RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, human

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-208	ENST00000448217	NME4	O00746	187 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	OR10H2	O60403	315 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	RAD1	O60671	282 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	ALOX12B	O75342	701 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	BCAS2	O75934	225 aa	Predicted RBP	11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	SOX30	O94993	753 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	HEXB	P07686	556 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	HSD17B1	P14061	328 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	PLA2G5	P39877	138 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	MC3R	P41968	323 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	GZMM	P51124	257 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	SLC7A2	P52569	658 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	LTB4R	Q15722	352 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	NSDHL	Q15738	373 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	RABL3	Q5HYI8	236 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	ZCCHC12	Q6PEW1	402 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	DGAT2L6	Q6ZPD8	337 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	C6orf120	Q7Z4R8	191 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	NET1	Q7Z628	596 aa	Predicted RBP	11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	SERPINA11	Q86U17	422 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	CALHM3	Q86XJ0	350 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	VWA5B2	Q8N398	1253 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	OR7G2	Q8NG99	324 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	OR7G1	Q8NGA0	311 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	OR14A16	Q8NHC5	309 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	CT55	Q8WUE5	264 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	RIT1	Q92963	219 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	GIMAP5	Q96F15	307 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	CDRT15	Q96T59	188 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	IKZF5	Q9H5V7	419 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	GPATCH2	Q9NW75	528 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	C3orf18	Q9UK00	162 aa		11.13	□□□□□ -0.63
SCAP-208	ENST00000448217	SPTBN4	Q9H254	2564 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	CFAP54	Q96N23	3096 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	TTC36	A6NLP5	189 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	BRINP1	O60477	761 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	CBX7	O95931	251 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	IGKV3-11	P04433	115 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	UMOD	P07911	640 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	CT62	P0C5K7	136 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	NT5E	P21589	574 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	PGM1	P36871	562 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	MAP3K8	P41279	467 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	CEACAM7	Q14002	265 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	SELPLG	Q14242	412 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	RGN	Q15493	299 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	TRMT12	Q53H54	448 aa	Known RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	FAM111B	Q6SJ93	734 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	TMEM107	Q6UX40	140 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	ANKRD37	Q7Z713	158 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	MARCH9	Q86YJ5	346 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	TMEM151B	Q8IW70	566 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	FBXW8	Q8N3Y1	598 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	ENDOV	Q8N8Q3	282 aa	Known RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	MORN4	Q8NDC4	146 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	ADCY4	Q8NFM4	1077 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	METTL21A	Q8WXB1	218 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	KAT2A	Q92830	837 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	DAZL	Q92904	295 aa	Known RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	NKD1	Q969G9	470 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	UTP4	Q969X6	686 aa	Known RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	MCUR1	Q96AQ8	359 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	PPWD1	Q96BP3	646 aa	Known RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	NXPE2	Q96DL1	559 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	AURKB	Q96GD4	344 aa	Predicted RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	FBXL20	Q96IG2	436 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	ART5	Q96L15	291 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	ZNF583	Q96ND8	569 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	MS4A4E	Q96PG1	132 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	THTPA	Q9BU02	230 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	CRB3	Q9BUF7	120 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	THUMPD3	Q9BV44	507 aa	Known RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	SOX17	Q9H6I2	414 aa	Predicted RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	THSD1	Q9NS62	852 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	THUMPD1	Q9NXG2	353 aa	Known RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	GIN1	Q9NXP7	522 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	TCFL5	Q9UL49	500 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	FARSA	Q9Y285	508 aa	Known RBP	11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	L3MBTL1	Q9Y468	752 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	SNX8	Q9Y5X2	465 aa		11.12	□□□□□ -0.63
SCAP-208	ENST00000448217	PRORSD1P	A6NEY8	169 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	FAM220BP	B1ANY3	271 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	C17orf105	B2RV13	164 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	ASNA1	O43681	348 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	DYRK3	O43781	588 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	COQ9	O75208	318 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	TNFRSF21	O75509	655 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	DDAH2	O95865	285 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	CLPS	P04118	112 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	IFNA16	P05015	189 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	TCN2	P20062	427 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	MMP11	P24347	488 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	HTR1E	P28566	365 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	SOAT1	P35610	550 aa		11.11	□□□□□ -0.63
SCAP-208	ENST00000448217	CHI3L1	P36222	383 aa	Predicted RBP	11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms