RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MED7O43513 233 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 STX10O60499 249 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 RBMXL2O75526 392 aaKnown RBP4.38□□□□□ -1.71
SDCBP-205ENST00000447267 REM1O75628 298 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 IGLV2-14P01704 120 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 FREM3P0C091 2139 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 PIRTP0C851 137 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 KRT5P13647 590 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 SELEP16581 610 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 ADRA2CP18825 462 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 PDHA2P29803 388 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 EFNA4P52798 201 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 SARNPP82979 210 aaKnown RBP4.38□□□□□ -1.71
SDCBP-205ENST00000447267 AMPD3Q01432 767 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 CCNIQ14094 377 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 RFTN1Q14699 578 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-205ENST00000447267 NSDHLQ15738 373 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 GLCCI1Q86VQ1 547 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 GRAMD1CQ8IYS0 662 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 EMC1Q8N766 993 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 CNEP1R1Q8N9A8 125 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 CCHCR1Q8TD31 782 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 RAB24Q969Q5 203 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 PDLIM2Q96JY6 352 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 LYSMD1Q96S90 227 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 TUBA1CQ9BQE3 449 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 SLC39A3Q9BRY0 314 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 ZSCAN5AQ9BUG6 496 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 BPIFA1Q9NP55 256 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 HIF1ANQ9NWT6 349 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 HPF1Q9NWY4 346 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 MOCS1Q9NZB8 636 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-205ENST00000447267 RSPH14Q9UHP6 348 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 KCNE5Q9UJ90 142 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 RPUSD1Q9UJJ7 312 aaKnown RBP4.38□□□□□ -1.71
SDCBP-205ENST00000447267 FBXW2Q9UKT8 454 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 CDC14AQ9UNH5 594 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 SHOC2Q9UQ13 582 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 TDRKHQ9Y2W6 561 aaKnown RBP4.38□□□□□ -1.71
SDCBP-205ENST00000447267 MMP24Q9Y5R2 645 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 HEBP2Q9Y5Z4 205 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 HECTD4Q9Y4D8 3996 aa4.38□□□□□ -1.71
SDCBP-205ENST00000447267 WI2-2373I1.2A0A1W2PRP0 233 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 TCRBV7S2A1N4TA0A589 114 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 RGSL1A5PLK6 1076 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 ANKRD62A6NC57 917 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 BECN2A8MW95 431 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 PRKNO60260 465 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-205ENST00000447267 CDC123O75794 336 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-205ENST00000447267 OR2J2O76002 312 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 ACSL3O95573 720 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 GPANK1O95872 356 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 CSF1P09603 554 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 CSF3P09919 207 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 CCL3P10147 92 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 SLC6A12P48065 614 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 AGTR2P50052 363 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 SSR4P51571 173 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 KRTAP10-11P60412 298 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 SIRPAP78324 504 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 GCNT1Q02742 428 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 SRYQ05066 204 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 ITKQ08881 620 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 HLXQ14774 488 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-205ENST00000447267 ABRAXAS2Q15018 415 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 ZSCAN26Q16670 478 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 CYP1B1Q16678 543 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 HKDC1Q2TB90 917 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 NCMAPQ5T1S8 102 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 AGAP6Q5VW22 663 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 C11orf71Q6IPW1 123 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 LRRC8BQ6P9F7 803 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 SASS6Q6UVJ0 657 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 CCDC91Q7Z6B0 441 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 ZDHHC17Q8IUH5 632 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 PM20D2Q8IYS1 436 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 NPWQ8N729 165 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 OR5AR1Q8NGP9 310 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 OR2L2Q8NH16 312 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 FAM71BQ8TC56 605 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 SLC35C1Q96A29 364 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 PHF21AQ96BD5 680 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 JSRP1Q96MG2 331 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-205ENST00000447267 SNX18Q96RF0 628 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 B9D2Q9BPU9 175 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 AIFM2Q9BRQ8 373 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 CNPY3Q9BT09 278 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 TRIM2Q9C040 744 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 KLK15Q9H2R5 256 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 GSTO2Q9H4Y5 243 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 SYNCQ9H7C4 482 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 ACKR4Q9NPB9 350 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 NLRC4Q9NPP4 1024 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 EIF2B3Q9NR50 452 aaKnown RBP4.37□□□□□ -1.71
SDCBP-205ENST00000447267 DNAJC11Q9NVH1 559 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 ELOVL5Q9NYP7 299 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 NFKBIL1Q9UBC1 381 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-205ENST00000447267 CIDEBQ9UHD4 219 aa4.37□□□□□ -1.71
SDCBP-205ENST00000447267 NOX1Q9Y5S8 564 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms