RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PELOQ9BRX2 385 aaKnown RBP10.01□□□□□ -0.81
SF3A1-203ENST00000444440 ACPTQ9BZG2 426 aa10.01□□□□□ -0.81
SF3A1-203ENST00000444440 ANKRA2Q9H9E1 313 aa10.01□□□□□ -0.81
SF3A1-203ENST00000444440 WDR41Q9HAD4 459 aa10.01□□□□□ -0.81
SF3A1-203ENST00000444440 BRF2Q9HAW0 419 aa10.01□□□□□ -0.81
SF3A1-203ENST00000444440 PNPLA3Q9NST1 481 aa10.01□□□□□ -0.81
SF3A1-203ENST00000444440 SACM1LQ9NTJ5 587 aa10.01□□□□□ -0.81
SF3A1-203ENST00000444440 MAT2BQ9NZL9 334 aa10.01□□□□□ -0.81
SF3A1-203ENST00000444440 KLF2Q9Y5W3 355 aaPredicted RBP10.01□□□□□ -0.81
SF3A1-203ENST00000444440 SMIM23A6NLE4 172 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 OR6C76A6NM76 312 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 NPIPA2E9PIF3 369 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 E9PLN8 166 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 NPIPA3F8WFD2 350 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 PRRG2O14669 202 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 CDH16O75309 829 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 ERAL1O75616 437 aaKnown RBP10□□□□□ -0.81
SF3A1-203ENST00000444440 IGHG3P01860 377 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 P04436 131 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 NT5EP21589 574 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 GPX3P22352 226 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 FBXW4P57775 412 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 VSNL1P62760 191 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 IFFO1Q0D2I5 559 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 NNATQ16517 81 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 NTRK2Q16620 822 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 HYAL4Q2M3T9 481 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 XKRXQ6PP77 449 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 GPRIN3Q6ZVF9 776 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 TRILQ7L0X0 811 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 SLC29A4Q7RTT9 530 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 GALNT12Q8IXK2 581 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 FBXW8Q8N3Y1 598 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 RIBC1Q8N443 379 aaPredicted RBP10□□□□□ -0.81
SF3A1-203ENST00000444440 SLC15A4Q8N697 577 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 FAM13CQ8NE31 585 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 OR5M9Q8NGP3 310 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 SLC22A8Q8TCC7 542 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 PHF10Q8WUB8 498 aaKnown RBP10□□□□□ -0.81
SF3A1-203ENST00000444440 C11orf24Q96F05 449 aaPredicted RBP10□□□□□ -0.81
SF3A1-203ENST00000444440 ZNF681Q96N22 645 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 VKORC1Q9BQB6 163 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 ROPN1BQ9BZX4 212 aaPredicted RBP10□□□□□ -0.81
SF3A1-203ENST00000444440 OR10A5Q9H207 317 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 ZNF703Q9H7S9 590 aaPredicted RBP10□□□□□ -0.81
SF3A1-203ENST00000444440 ROPN1Q9HAT0 212 aaPredicted RBP10□□□□□ -0.81
SF3A1-203ENST00000444440 IL1RL2Q9HB29 575 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 SPRR3Q9UBC9 169 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 ZNF639Q9UID6 485 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 GRID1Q9ULK0 1009 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 SNX6Q9UNH7 406 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 STK38LQ9Y2H1 464 aa10□□□□□ -0.81
SF3A1-203ENST00000444440 A0A1B0GVC2 190 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 C2orf92A0A1B0GVN3 265 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 ATP6AP2A0A1C7CYW4 349 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 TLDC2A0PJX2 215 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 C1orf226A1L170 272 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 HNRNPRO43390 633 aaKnown RBP9.99□□□□□ -0.81
SF3A1-203ENST00000444440 DYRK3O43781 588 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 GLRA3O75311 464 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 ATP6AP2O75787 350 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 CLDN14O95500 239 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 CBX7O95931 251 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 IL3P08700 152 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 PORP16435 677 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-203ENST00000444440 AGAP20933 346 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 CRHR1P34998 444 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 NAA20P61599 178 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 MRPS35P82673 323 aaKnown RBP9.99□□□□□ -0.81
SF3A1-203ENST00000444440 LCP2Q13094 533 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 CCDC153Q494R4 210 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 TRMT12Q53H54 448 aaKnown RBP9.99□□□□□ -0.81
SF3A1-203ENST00000444440 FNDC7Q5VTL7 733 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 SLC22A10Q63ZE4 541 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 RTL6Q6ICC9 239 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 MTFR2Q6P444 385 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 ARHGAP11AQ6P4F7 1023 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 ZYG11AQ6WRX3 759 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 GK5Q6ZS86 529 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 PAGE2Q7Z2X7 111 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 SLC22A16Q86VW1 577 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 MCEMP1Q8IX19 187 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 SRRM1Q8IYB3 904 aaKnown RBP9.99□□□□□ -0.81
SF3A1-203ENST00000444440 SLC34A3Q8N130 599 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 FAM109AQ8N4B1 249 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 OR2W6PQ8NHA6 318 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 METTL6Q8TCB7 284 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 CTHRC1Q96CG8 243 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 KLHL29Q96CT2 875 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 NTNG2Q96CW9 530 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 EBPLQ9BY08 206 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 BRINP2Q9C0B6 783 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 NXF5Q9H1B4 397 aaKnown RBP9.99□□□□□ -0.81
SF3A1-203ENST00000444440 SLC6A15Q9H2J7 730 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 NMRK1Q9NWW6 199 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 AHSPQ9NZD4 102 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 VPS29Q9UBQ0 182 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 FAM215AQ9Y5M1 114 aa9.99□□□□□ -0.81
SF3A1-203ENST00000444440 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.99□□□□□ -0.81
SF3A1-203ENST00000444440 CELSR1Q9NYQ6 3014 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms