RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 NXNQ6DKJ4 435 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 TUBA3EQ6PEY2 450 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 RGS9BPQ6ZS82 235 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 Q6ZS92 163 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 FAM47EQ6ZV65 393 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 SLC29A4Q7RTT9 530 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 MAVSQ7Z434 540 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 SPATA19Q7Z5L4 167 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 C9orf40Q8IXQ3 194 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 FAM9CQ8IZT9 166 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 KRTCAP2Q8N6L1 136 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 ZNF615Q8N8J6 731 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 OR9A2Q8NGT5 310 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 SUN3Q8TAQ9 357 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 ZNF675Q8TD23 568 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 KAT2AQ92830 837 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 PNPLA2Q96AD5 504 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 ZNF764Q96H86 408 aaPredicted RBP11.44□□□□□ -0.58
USP1-203ENST00000442679 AMDHD1Q96NU7 426 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 GLIPR2Q9H4G4 154 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 ANKRD10Q9NXR5 420 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 BCAP29Q9UHQ4 241 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 ATP6V1HQ9UI12 483 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 ZNF639Q9UID6 485 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 YARS2Q9Y2Z4 477 aaKnown RBP11.44□□□□□ -0.58
USP1-203ENST00000442679 CFAP46Q8IYW2 2715 aa11.44□□□□□ -0.58
USP1-203ENST00000442679 SPENQ96T58 3664 aaKnown RBP11.44□□□□□ -0.58
USP1-203ENST00000442679 TCP11X1B4DZS4 312 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 CDK2AP1O14519 115 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 SCAMP2O15127 329 aaKnown RBP11.43□□□□□ -0.58
USP1-203ENST00000442679 PDPK1O15530 556 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 SUV39H1O43463 412 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 DIAPH2O60879 1101 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 OR2J2O76002 312 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 TGDSO95455 350 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 CBX7O95931 251 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 TRHRP34981 398 aaPredicted RBP11.43□□□□□ -0.58
USP1-203ENST00000442679 SOX18P35713 384 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 CASRP41180 1078 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 HLCSP50747 726 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 SSR4P51571 173 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 CLDN8P56748 225 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 MRPS35P82673 323 aaKnown RBP11.43□□□□□ -0.58
USP1-203ENST00000442679 ZNF169Q14929 603 aaPredicted RBP11.43□□□□□ -0.58
USP1-203ENST00000442679 TLR1Q15399 786 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 MPEG1Q2M385 716 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 ZNF385BQ569K4 471 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 PIGGQ5H8A4 983 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 CPTPQ5TA50 214 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 ZNF468Q5VIY5 522 aaPredicted RBP11.43□□□□□ -0.58
USP1-203ENST00000442679 HLA-DQA1Q5Y7H0 255 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 OGFOD2Q6N063 350 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 EPGNQ6UW88 154 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 RIMKLAQ8IXN7 391 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 TMEM156Q8N614 296 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 SIMC1Q8NDZ2 872 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 OR7A2PQ8NGA2 310 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 NUBPLQ8TB37 319 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 ACTRT2Q8TDY3 377 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 NUDT8Q8WV74 236 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 CIDECQ96AQ7 238 aaPredicted RBP11.43□□□□□ -0.58
USP1-203ENST00000442679 CTHRC1Q96CG8 243 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 ERP27Q96DN0 273 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 MAELQ96JY0 434 aaKnown RBP11.43□□□□□ -0.58
USP1-203ENST00000442679 GAL3ST4Q96RP7 486 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 PRPF18Q99633 342 aaKnown RBP11.43□□□□□ -0.58
USP1-203ENST00000442679 WWTR1Q9GZV5 400 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 SLAMF7Q9NQ25 335 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 LUZP4Q9P127 313 aa11.43□□□□□ -0.58
USP1-203ENST00000442679 TLN1Q9Y490 2541 aaKnown RBP11.43□□□□□ -0.58
USP1-203ENST00000442679 TNRC6AQ8NDV7 1962 aaKnown RBP11.42□□□□□ -0.58
USP1-203ENST00000442679 TRAV17A0A0B4J275 112 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 C2orf92A0A1B0GVN3 265 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 PRAMEF2O60811 474 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 BCAS2O75934 225 aaPredicted RBP11.42□□□□□ -0.58
USP1-203ENST00000442679 ALDOCP09972 364 aaKnown RBP11.42□□□□□ -0.58
USP1-203ENST00000442679 LAMP1P11279 417 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 CYB561P49447 251 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 MANFP55145 182 aaKnown RBP11.42□□□□□ -0.58
USP1-203ENST00000442679 C21orf58P58505 322 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 DUSP8Q13202 625 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 EBPQ15125 230 aaKnown RBP11.42□□□□□ -0.58
USP1-203ENST00000442679 OR1C1Q15619 314 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 PGS1Q32NB8 556 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 SPINK14Q6IE38 97 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 ZNF551Q7Z340 670 aaPredicted RBP11.42□□□□□ -0.58
USP1-203ENST00000442679 PRICKLE2Q7Z3G6 844 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 HORMAD2Q8N7B1 307 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 Q8NA96 180 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 OR52R1Q8NGF1 315 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 CEP70Q8NHQ1 597 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 C16orf52Q8NHV5 167 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 ZFP28Q8NHY6 868 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 COQ8BQ96D53 544 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 ZBED6CLQ96FA7 236 aaPredicted RBP11.42□□□□□ -0.58
USP1-203ENST00000442679 SIGLEC12Q96PQ1 595 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 OR52B2Q96RD2 323 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 RASL10BQ96S79 203 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 DPY30Q9C005 99 aa11.42□□□□□ -0.58
USP1-203ENST00000442679 ANKRA2Q9H9E1 313 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms