RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 TRIM16LQ309B1 348 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ALKBH6Q3KRA9 238 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 IQCCQ4KMZ1 466 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 KLHL22Q53GT1 634 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 BRMS1LQ5PSV4 323 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 C6orf10Q5SRN2 563 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 CGB2Q6NT52 195 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 WDR59Q6PJI9 974 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 GDF7Q7Z4P5 450 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 GPR180Q86V85 440 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 CDK20Q8IZL9 346 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 CPXM2Q8N436 756 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 TRAM1L1Q8N609 369 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 RP9Q8TA86 221 aaKnown RBP5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 GRHL3Q8TE85 626 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ST6GALNAC6Q969X2 333 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 PHF21AQ96BD5 680 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 TAMM41Q96BW9 452 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ELMOD3Q96FG2 381 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ZNF583Q96ND8 569 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 APOL2Q9BQE5 337 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 IL22Q9GZX6 179 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 MAGT1Q9H0U3 335 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 LRRN3Q9H3W5 708 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 Q9H521 79 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ZNF160Q9HCG1 818 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 OLAHQ9NV23 265 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 CMTM6Q9NX76 183 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SEC14L3Q9UDX4 400 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SLC25A13Q9UJS0 675 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 NOCTQ9UK39 431 aaKnown RBP5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SCML1Q9UN30 329 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 THSD7AQ9UPZ6 1657 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SPATA31A6Q5VVP1 1343 aa5.55□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 OR5K3A6NET4 321 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ERI2A8K979 691 aaKnown RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 E7ENX8 843 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 HAS3O00219 553 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ACOX3O15254 700 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 FOXN1O15353 648 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 MOCS3O95396 460 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 CTXN2P0C2S0 81 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 OR52Z1P0C646 297 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 CYP2D6P10635 497 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 GFAPP14136 432 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 GCSHP23434 173 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 GALCP54803 685 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 PSMD4P55036 377 aaKnown RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ACTBP60709 375 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ACTA2P62736 377 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ACTG1P63261 375 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ACTG2P63267 376 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ACTC1P68032 377 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ACTA1P68133 377 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 MC2RQ01718 297 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SIGLEC14Q08ET2 396 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 PPP1R3AQ16821 1122 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 PCK2Q16822 640 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 GXYLT1Q4G148 440 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 RAET1LQ5VY80 246 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 BSPRYQ5W0U4 402 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 NANOGP8Q6NSW7 305 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 PRUNE1Q86TP1 453 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 RALGPS2Q86X27 583 aaPredicted RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ZFAND4Q86XD8 727 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ZNF444Q8N0Y2 327 aaPredicted RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 BEND2Q8NDZ0 799 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 FBXL13Q8NEE6 735 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 OR52N1Q8NH53 320 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 MCOLN3Q8TDD5 553 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 U2AF1L4Q8WU68 220 aaKnown RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 TRUB1Q8WWH5 349 aaKnown RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ELMO1Q92556 727 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 FCGR1BQ92637 280 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 CD101Q93033 1021 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 AJUBAQ96IF1 538 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SERPINB12Q96P63 405 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SLITRK1Q96PX8 696 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 TEFMQ96QE5 360 aaKnown RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 TGS1Q96RS0 853 aaKnown RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 H2AFJQ9BTM1 129 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 HOXD1Q9GZZ0 328 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 RACGAP1Q9H0H5 632 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ATG10Q9H0Y0 220 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 NHEJ1Q9H9Q4 299 aaPredicted RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ROPN1Q9HAT0 212 aaPredicted RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ABCB10Q9NRK6 738 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 GTSE1Q9NYZ3 720 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 TFR2Q9UP52 801 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ZNF175Q9Y473 711 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 INSL6Q9Y581 213 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SBF2Q86WG5 1849 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 GNG14A0A1W2PPG7 69 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 MTMR11A4FU01 709 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 FBLL1A6NHQ2 334 aaKnown RBP5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 SDR42E2A6NKP2 422 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 ZAR1LA6NP61 321 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 H3BNX3 289 aa5.54□□□□□ -1.52
ALMS1-IT1-201ENST00000441587 H3BSA7 217 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms