RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ACSM5Q6NUN0 579 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 TCTN3Q6NUS6 607 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 PGBD2Q6P3X8 592 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 ZNF655Q8N720 491 aaPredicted RBP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 OR7G3Q8NG95 312 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 UFD1Q92890 307 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 ZNF582Q96NG8 517 aaPredicted RBP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 REEP4Q9H6H4 257 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 MVB12BQ9H7P6 319 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 TESQ9UGI8 421 aaKnown RBP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 GPR52Q9Y2T5 361 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 KIAA0100Q14667 2235 aaKnown RBP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 OR56A5P0C7T3 313 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 ARAFP10398 606 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 RAB8AP61006 207 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 ELOAQ14241 798 aaKnown RBP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 PRSS53Q2L4Q9 553 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 CCSMST1Q4G0I0 132 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 CCNJQ5T5M9 372 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 TRILQ7L0X0 811 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 LHFPL3Q86UP9 236 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 GHDCQ8N2G8 530 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 ARL14EPQ8N8R7 260 aaPredicted RBP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 BHLHE41Q9C0J9 482 aaPredicted RBP19.22■□□□□ 0.67
SHOX2-203ENST00000441443 MGAT4BQ9UQ53 548 aa19.22■□□□□ 0.67
SHOX2-203ENST00000441443 LALBAP00709 142 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 OR12D1P0DN82 309 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 LRRC73Q5JTD7 316 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 WFDC5Q8TCV5 224 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 UCN3Q969E3 161 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 ASIC4Q96FT7 647 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 OR4K3Q96R72 315 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 CD84Q9UIB8 345 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 AUP1Q9Y679 476 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 THSD7BQ9C0I4 1608 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 STK25O00506 426 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 BCHEP06276 602 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 CXCL3P19876 107 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 GINS1Q14691 196 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 AANATQ16613 207 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 RNLSQ5VYX0 342 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 TNFAIP8L2Q6P589 184 aaPredicted RBP19.21■□□□□ 0.67
SHOX2-203ENST00000441443 MMP21Q8N119 569 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 ZNF366Q8N895 744 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 GPR32P1Q8NGA4 272 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 SLC7A13Q8TCU3 470 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 DEFB118Q96PH6 123 aa19.21■□□□□ 0.67
SHOX2-203ENST00000441443 MRPL9Q9BYD2 267 aaKnown RBP19.21■□□□□ 0.67
SHOX2-203ENST00000441443 ELAC1Q9H777 363 aaKnown RBP19.21■□□□□ 0.67
SHOX2-203ENST00000441443 GFYI3L273 518 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 SGK494L7N484 410 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 CSKP41240 450 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 CSNK1DP48730 415 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 C2orf80Q0P641 193 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 TPBGQ13641 420 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 MARCH9Q86YJ5 346 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 HS6ST3Q8IZP7 471 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 GOT1L1Q8NHS2 421 aaPredicted RBP19.2■□□□□ 0.66
SHOX2-203ENST00000441443 PPCDCQ96CD2 204 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 RABL2BQ9UNT1 228 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 DVL2O14641 736 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 SOD1P00441 154 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 TP53P04637 393 aaPredicted RBP19.2■□□□□ 0.66
SHOX2-203ENST00000441443 ELK1P19419 428 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 EXOSC2Q13868 293 aaKnown RBP19.2■□□□□ 0.66
SHOX2-203ENST00000441443 CHST9Q7L1S5 443 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 KIF18BQ86Y91 864 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 SLC30A8Q8IWU4 369 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 OR4D11Q8NGI4 311 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 NEIL3Q8TAT5 605 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 FOLH1BQ9HBA9 442 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 SEMA3GQ9NS98 782 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 ZSCAN32Q9NX65 697 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 EXTL2Q9UBQ6 330 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 SCML1Q9UN30 329 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 YIPF1Q9Y548 306 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 SCN5AQ14524 2016 aa19.2■□□□□ 0.66
SHOX2-203ENST00000441443 CD8B2A6NJW9 211 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 ATP6V1G2-DDX39BF2Z307 99 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 TPOP07202 933 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 H1F0P07305 194 aaKnown RBP19.19■□□□□ 0.66
SHOX2-203ENST00000441443 CD8BP10966 210 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 SLC6A1P30531 599 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 GABRA5P31644 462 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 CCT3P49368 545 aaKnown RBP19.19■□□□□ 0.66
SHOX2-203ENST00000441443 DSTNP60981 165 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 PIN1Q13526 163 aaPredicted RBP19.19■□□□□ 0.66
SHOX2-203ENST00000441443 TSTA3Q13630 321 aaPredicted RBP19.19■□□□□ 0.66
SHOX2-203ENST00000441443 FAM26EQ8N5C1 309 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 BMPERQ8N8U9 685 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 SLC43A3Q8NBI5 491 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 SLC9A6Q92581 669 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 RNFT2Q96EX2 444 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 ABCG5Q9H222 651 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 NUDT15Q9NV35 164 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 AP1S1P61966 158 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 ADAM15Q13444 863 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 GALEQ14376 348 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 BICRALQ6AI39 1079 aa19.19■□□□□ 0.66
SHOX2-203ENST00000441443 SLC8B1Q6J4K2 584 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms