RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 ENTPD4Q9Y227 616 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 SLC9A8Q9Y2E8 581 aa3.8□□□□□ -1.8
PFDN4-202ENST00000441080 DHX29Q7Z478 1369 aaKnown RBP3.79□□□□□ -1.8
PFDN4-202ENST00000441080 ARPC1BO15143 372 aaKnown RBP3.79□□□□□ -1.8
PFDN4-202ENST00000441080 SRSF10O75494 262 aaKnown RBP3.79□□□□□ -1.8
PFDN4-202ENST00000441080 IGHG3P01860 377 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 VDRP11473 427 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 UCP1P25874 307 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 TRIM23P36406 574 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 RPL34P49207 117 aaKnown RBP3.79□□□□□ -1.8
PFDN4-202ENST00000441080 CCL11P51671 97 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 SSTP61278 116 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 ABRAXAS2Q15018 415 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 C17orf58Q2M2W7 97 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 SHROOM1Q2M3G4 852 aaPredicted RBP3.79□□□□□ -1.8
PFDN4-202ENST00000441080 C14orf28Q4W4Y0 310 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 CMPK2Q5EBM0 449 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 RNLSQ5VYX0 342 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
PFDN4-202ENST00000441080 CWC27Q6UX04 472 aaKnown RBP3.79□□□□□ -1.8
PFDN4-202ENST00000441080 BNIPLQ7Z465 357 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 LUZP1Q86V48 1076 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 MARCH9Q86YJ5 346 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 BATF2Q8N1L9 274 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 ARL14Q8N4G2 192 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 NEK11Q8NG66 645 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 RHOXF1Q8NHV9 184 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 URGCPQ8TCY9 931 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 P3H4Q92791 437 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 BIRC7Q96CA5 298 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 RAB3CQ96E17 227 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 C19orf43Q9BQ61 176 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 RNF41Q9H4P4 317 aaPredicted RBP3.79□□□□□ -1.8
PFDN4-202ENST00000441080 AMBNQ9NP70 447 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 HPS4Q9NQG7 708 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 ARMCX1Q9P291 453 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 IKZF3Q9UKT9 509 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 KNSTRNQ9Y448 316 aa3.79□□□□□ -1.8
PFDN4-202ENST00000441080 FAM205AQ6ZU69 1335 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 A0A0A6YYD4 124 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 E2F3O00716 465 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 KBTBD11O94819 623 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 MFAP2P55001 183 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 CASP9P55211 416 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 CARTPTQ16568 116 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 CLPPQ16740 277 aaPredicted RBP3.78□□□□□ -1.8
PFDN4-202ENST00000441080 ACER2Q5QJU3 275 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 APOOLQ6UXV4 268 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 COLGALT1Q8NBJ5 622 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 ACCSQ96QU6 501 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 APOL2Q9BQE5 337 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 TTYH2Q9BSA4 534 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 ZBP1Q9H171 429 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 CUTCQ9NTM9 273 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 GPR83Q9NYM4 423 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 DHRS4-AS1Q9P1J3 65 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 RCOR3Q9P2K3 495 aaPredicted RBP3.78□□□□□ -1.8
PFDN4-202ENST00000441080 FETUBQ9UGM5 382 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 MLXQ9UH92 298 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 EMCNQ9ULC0 261 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 RNF24Q9Y225 148 aa3.78□□□□□ -1.8
PFDN4-202ENST00000441080 STRAPQ9Y3F4 350 aaKnown RBP3.78□□□□□ -1.8
PFDN4-202ENST00000441080 NPC1L1Q9UHC9 1359 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 TRAV9-2A0A087WT02 112 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 SLC9B1P1A6NJY1 282 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 CYB561D2O14569 222 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 CFLARO15519 480 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 ZBTB14O43829 449 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 ZNF253O75346 499 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 BCAS2O75934 225 aaPredicted RBP3.77□□□□□ -1.81
PFDN4-202ENST00000441080 GOT2P00505 430 aaKnown RBP3.77□□□□□ -1.81
PFDN4-202ENST00000441080 NPY2RP49146 381 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 PEX6Q13608 980 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 LINC00242Q5T6M2 205 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 FAM219BQ5XKK7 198 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 RABEPKQ7Z6M1 372 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 ADAMTSL2Q86TH1 951 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 SERINC5Q86VE9 423 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 SLC22A18ASQ8N1D0 253 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 PYROXD2Q8N2H3 581 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 MLKLQ8NB16 471 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 CCNYQ8ND76 341 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 TBCKQ8TEA7 893 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 TMEM37Q8WXS4 190 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 TMEM45BQ96B21 275 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 MCCC1Q96RQ3 725 aaPredicted RBP3.77□□□□□ -1.81
PFDN4-202ENST00000441080 CPXM1Q96SM3 734 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 RUFY1Q96T51 708 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 GPR174Q9BXC1 333 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 NLNQ9BYT8 704 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 ADGRL4Q9HBW9 690 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 SYTL2Q9HCH5 934 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 NRN1Q9NPD7 142 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 HOMER3Q9NSC5 361 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 IL19Q9UHD0 177 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 ZNF175Q9Y473 711 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 HCFC1P51610 2035 aa3.77□□□□□ -1.81
PFDN4-202ENST00000441080 NUDT14O95848 222 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms