RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 Q6ZSR6 202 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 MACROD1Q9BQ69 325 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 TMEM168Q9H0V1 697 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 RHBGQ9H310 441 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 MVB12BQ9H7P6 319 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 PELI2Q9HAT8 420 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 NEK6Q9HC98 313 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 ICKQ9UPZ9 632 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 LRP4O75096 1905 aa13.13□□□□□ -0.31
PTCHD3-201ENST00000438700 FANCMQ8IYD8 2048 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 WASHC1A8K0Z3 465 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 FOSL2P15408 326 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 ITGA2P17301 1181 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 PTGER1P34995 402 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 CASP3P42574 277 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 CDC20Q12834 499 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 SPDYE7PQ495Y7 208 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 WASH2PQ6VEQ5 465 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 USP43Q70EL4 1123 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 PRSS48Q7RTY5 328 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 FRMD1Q8N878 549 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 TSTD1Q8NFU3 115 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 SLC38A5Q8WUX1 472 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 PIP5K1AQ99755 562 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 COPS4Q9BT78 406 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 CPNE5Q9HCH3 593 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 CCNB1IP1Q9NPC3 277 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 WASH6PQ9NQA3 447 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 THSD1Q9NS62 852 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 SLC6A14Q9UN76 642 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 ANKRD34BA5PLL1 514 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 CHURC1-FNTBB4DL54 471 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 C10orf142B7Z368 130 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 ASNA1O43681 348 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 GADD45GO95257 159 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 RECKO95980 971 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 IFNA14P01570 189 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 CXCR2P25025 360 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 GGT2P36268 569 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 ACTR1BP42025 376 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 XCR1P46094 333 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 CLK1P49759 484 aaKnown RBP13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 SRP54P61011 504 aaKnown RBP13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 ACTR1AP61163 376 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 TP53BP2Q13625 1128 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 UBXN2BQ14CS0 331 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 HEPACAMQ14CZ8 416 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 ALG11Q2TAA5 492 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 KIAA0895LQ68EN5 471 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 REEP3Q6NUK4 255 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 SVOPQ8N4V2 548 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 OR13H1Q8NG92 308 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 OR2L8Q8NGY9 312 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 JPH3Q8WXH2 748 aaPredicted RBP13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 C17orf62Q9BQA9 187 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 GPR174Q9BXC1 333 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 RAB11FIP5Q9BXF6 653 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 PCDHGA3Q9Y5H0 932 aa13.12□□□□□ -0.31
PTCHD3-201ENST00000438700 OR2A25A4D2G3 310 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 C5orf58C9J3I9 102 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 E9PQ18 207 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 AP3D1O14617 1153 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 DSCR3O14972 297 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 NDUFS4O43181 175 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 B4GALT2O60909 372 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 GUCY1B2O75343 617 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 PRKRAO75569 313 aaKnown RBP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 SEMA3DO95025 777 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 ANXA8P13928 327 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 ALOX12P18054 663 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 GADD45AP24522 165 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 CRISP3P54108 245 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 YPEL5P62699 121 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 REEP5Q00765 189 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 CCBE1Q6UXH8 406 aaPredicted RBP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 GDPD3Q7L5L3 318 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 RLN3Q8WXF3 142 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 TMEM19Q96HH6 336 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 TPSD1Q9BZJ3 242 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 SP140LQ9H930 580 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 POFUT2Q9Y2G5 429 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 PCDHGA2Q9Y5H1 932 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 ARHGEF17Q96PE2 2063 aaPredicted RBP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 IGKV1-8A0A0C4DH67 115 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 AGAP5A6NIR3 686 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 GLOD5A6NK44 160 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 A8MV72 311 aaPredicted RBP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 PRAMEF26H0Y7S4 382 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 M0R082 166 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 TNFRSF10CO14798 259 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 IFNW1P05000 195 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 RACK1P63244 317 aaKnown RBP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 LRRC32Q14392 662 aa13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 PUM1Q14671 1186 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTCHD3-201ENST00000438700 SAXO2Q658L1 398 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms