RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 AIG1Q9NVV5 245 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 HSPE1-MOB4S4R3N1 261 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 FOLR3P41439 243 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 SLC6A8P48029 635 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF404Q494X3 552 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 DPPA4Q7L190 304 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 MAMDC2Q7Z304 686 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF584Q8IVC4 421 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 OR51G2Q8NGK0 314 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 PGAM5Q96HS1 289 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 FZD3Q9NPG1 666 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 CNMDO75829 334 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 FRKP42685 505 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-204ENST00000436978 OR4D1Q15615 310 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 TMPRSS9Q7Z410 1059 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 RTP4Q96DX8 246 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 SLC45A3Q96JT2 553 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 NSUN5Q96P11 429 aaKnown RBP15.13■□□□□ 0.01
PTPN13-204ENST00000436978 CTC1Q2NKJ3 1217 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF611Q8N823 705 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 RPLP0P6Q8NHW5 317 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 NECAB3Q96P71 396 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-204ENST00000436978 FUZQ9BT04 418 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 NANSQ9NR45 359 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 A8MVJ9 347 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 PTGESO14684 152 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 YES1P07947 543 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 MRPL3P09001 348 aaKnown RBP15.13■□□□□ 0.01
PTPN13-204ENST00000436978 CD3GP09693 182 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 OTX2P32243 289 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 GABARAPL2P60520 117 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 MEP1AQ16819 746 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 VMACQ2NL98 169 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 CCSAPQ6IQ19 270 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-204ENST00000436978 JPH3Q8WXH2 748 aaPredicted RBP15.13■□□□□ 0.01
PTPN13-204ENST00000436978 URM1Q9BTM9 101 aaKnown RBP15.13■□□□□ 0.01
PTPN13-204ENST00000436978 HPF1Q9NWY4 346 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 KCNIP3Q9Y2W7 256 aa15.13■□□□□ 0.01
PTPN13-204ENST00000436978 CIB4A0PJX0 185 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ADORA3P0DMS8 318 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ERP29P30040 261 aaKnown RBP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 TMED4Q7Z7H5 227 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 PDZD3Q86UT5 571 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 TMEM25Q86YD3 366 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 C16orf78Q8WTQ4 265 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 FBXL8Q96CD0 374 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 SLC12A9Q9BXP2 914 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ATG5Q9H1Y0 275 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 PREBQ9HCU5 417 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 SAGE1Q9NXZ1 904 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 A0A0J9YY10 115 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 MLLT1Q03111 559 aaPredicted RBP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 OR6C4Q8NGE1 309 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 OR10Q1Q8NGQ4 319 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 NEIL3Q8TAT5 605 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 SORCS1Q8WY21 1168 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 MYRFLQ96LU7 910 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 MTHFD2LQ9H903 347 aaPredicted RBP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 PROS1P07225 676 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 VIPR2P41587 438 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 GRIN2CQ14957 1233 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 MFSD13AQ14CX5 517 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 RFT1Q96AA3 541 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ZNF350Q9GZX5 532 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ADAMTS5Q9UNA0 930 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 SOBPA7XYQ1 873 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ANKDD1AQ495B1 522 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ABHD12BQ7Z5M8 362 aaPredicted RBP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 CBARPQ8N350 705 aaPredicted RBP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 DNAAF1Q8NEP3 725 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 PEX11GQ96HA9 241 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 F2RL3Q96RI0 385 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 KCNS2Q9ULS6 477 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 MBLAC1A4D2B0 266 aaPredicted RBP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 PRPS1P60891 318 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 LCTLQ6UWM7 567 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 TTLL10Q6ZVT0 673 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 GATSQ8NAP1 163 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 NDUFV2P19404 249 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 TMBIM6P55061 237 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 C1orf189Q5VU69 101 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 NAXEQ8NCW5 288 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 EVA1AQ9H8M9 152 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 USP54Q70EL1 1684 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ISPDA4D126 451 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 FAM227AF5H4B4 570 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 CA3P07451 260 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 UBE2NP61088 152 aaKnown RBP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 KIR2DS3Q14952 304 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ARHGAP19Q14CB8 494 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 MPP7Q5T2T1 576 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 CPXM2Q8N436 756 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 THAP3Q8WTV1 239 aaPredicted RBP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 ZFYVE21Q9BQ24 234 aa15.12■□□□□ 0.01
PTPN13-204ENST00000436978 CCM2LQ9NUG4 571 aaPredicted RBP15.12■□□□□ 0.01
PTPN13-204ENST00000436978 SLITRK5O94991 958 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 TDGQ13569 410 aa15.11■□□□□ 0.01
PTPN13-204ENST00000436978 LIX1LQ8IVB5 337 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms