RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MAP4K2Q12851 820 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 FADDQ13158 208 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 TP53BP2Q13625 1128 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 RGNQ15493 299 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 NSDHLQ15738 373 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 C6orf163Q5TEZ5 329 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 FAM111BQ6SJ93 734 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 DGAT2L6Q6ZPD8 337 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 SZRD1Q7Z422 152 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 SERPINA11Q86U17 422 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 GALNT12Q8IXK2 581 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 OR2L13Q8N349 312 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 MAGED4Q96JG8 741 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 CXorf21Q9HAI6 301 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 DDX18Q9NVP1 670 aaKnown RBP21.52■■□□□ 1.03
CPSF4-204ENST00000436336 GPATCH2Q9NW75 528 aa21.52■■□□□ 1.03
CPSF4-204ENST00000436336 IDSB3KWA1 339 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 UPK1AO00322 258 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 PLOD3O60568 738 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 SORBS2O94875 1100 aaKnown RBP21.51■■□□□ 1.03
CPSF4-204ENST00000436336 IFNA16P05015 189 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 HEXBP07686 556 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 CD63P08962 238 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 TCN1P20061 433 aaPredicted RBP21.51■■□□□ 1.03
CPSF4-204ENST00000436336 CORO7P57737 925 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 GABREP78334 506 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 MAP7Q14244 749 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 NCF4Q15080 339 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 SHISA6Q6ZSJ9 500 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 TIPARPQ7Z3E1 657 aaKnown RBP21.51■■□□□ 1.03
CPSF4-204ENST00000436336 IFNEQ86WN2 208 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 CALHM3Q86XJ0 350 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 RNF130Q86XS8 419 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 FAM156AQ8NDB6 213 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 NUP43Q8NFH3 380 aa21.51■■□□□ 1.03
CPSF4-204ENST00000436336 KCTD14Q9BQ13 255 aaPredicted RBP21.51■■□□□ 1.03
CPSF4-204ENST00000436336 TMEM121BQ9BXQ6 578 aaPredicted RBP21.51■■□□□ 1.03
CPSF4-204ENST00000436336 SUCOQ9UBS9 1254 aaKnown RBP21.51■■□□□ 1.03
CPSF4-204ENST00000436336 RRP15Q9Y3B9 282 aaKnown RBP21.51■■□□□ 1.03
CPSF4-204ENST00000436336 CT62P0C5K7 136 aa21.5■■□□□ 1.03
CPSF4-204ENST00000436336 GZMMP51124 257 aa21.5■■□□□ 1.03
CPSF4-204ENST00000436336 TRMT12Q53H54 448 aaKnown RBP21.5■■□□□ 1.03
CPSF4-204ENST00000436336 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.5■■□□□ 1.03
CPSF4-204ENST00000436336 FHL5Q5TD97 284 aa21.5■■□□□ 1.03
CPSF4-204ENST00000436336 MARCH9Q86YJ5 346 aa21.5■■□□□ 1.03
CPSF4-204ENST00000436336 C10orf111Q8N326 155 aa21.5■■□□□ 1.03
CPSF4-204ENST00000436336 VWA5B2Q8N398 1253 aa21.5■■□□□ 1.03
CPSF4-204ENST00000436336 CCDC124Q96CT7 223 aaKnown RBP21.5■■□□□ 1.03
CPSF4-204ENST00000436336 SLC35G5Q96KT7 338 aa21.5■■□□□ 1.03
CPSF4-204ENST00000436336 ZNF578Q96N58 590 aaPredicted RBP21.5■■□□□ 1.03
CPSF4-204ENST00000436336 SPATA9Q9BWV2 254 aa21.5■■□□□ 1.03
CPSF4-204ENST00000436336 ADAP2Q9NPF8 381 aa21.5■■□□□ 1.03
CPSF4-204ENST00000436336 C19orf53Q9UNZ5 99 aaPredicted RBP21.5■■□□□ 1.03
CPSF4-204ENST00000436336 FAM220BPB1ANY3 271 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 CIB2O75838 187 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 TNNI3P19429 210 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 SLC5A2P31639 672 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 CRATP43155 626 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 MAGEA8P43361 318 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 PRKAG1P54619 331 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 EMP2P54851 167 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 ESX1Q8N693 406 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 FAM13CQ8NE31 585 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 OR2T12Q8NG77 320 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 ASB9Q96DX5 294 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 SLC46A1Q96NT5 459 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 PIF1Q9H611 641 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 GMPR2Q9P2T1 348 aaKnown RBP21.49■■□□□ 1.03
CPSF4-204ENST00000436336 ZNF639Q9UID6 485 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 POMPQ9Y244 141 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 ALOX12BO75342 701 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 HTR1EP28566 365 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 BNIP2Q12982 314 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 TRIM25Q14258 630 aaKnown RBP21.49■■□□□ 1.03
CPSF4-204ENST00000436336 ELAVL1Q15717 326 aaKnown RBP21.49■■□□□ 1.03
CPSF4-204ENST00000436336 COX20Q5RI15 118 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 NET1Q7Z628 596 aaPredicted RBP21.49■■□□□ 1.03
CPSF4-204ENST00000436336 TNIP2Q8NFZ5 429 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 METTL21AQ8WXB1 218 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 MS4A4EQ96PG1 132 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 CRB3Q9BUF7 120 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 ANKRA2Q9H9E1 313 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 PNO1Q9NRX1 252 aaKnown RBP21.49■■□□□ 1.03
CPSF4-204ENST00000436336 C3orf18Q9UK00 162 aa21.49■■□□□ 1.03
CPSF4-204ENST00000436336 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.48■■□□□ 1.03
CPSF4-204ENST00000436336 C17orf105B2RV13 164 aa21.48■■□□□ 1.03
CPSF4-204ENST00000436336 DYRK3O43781 588 aa21.48■■□□□ 1.03
CPSF4-204ENST00000436336 HMGN2P05204 90 aaKnown RBP21.48■■□□□ 1.03
CPSF4-204ENST00000436336 RBMS1P29558 406 aaKnown RBP21.48■■□□□ 1.03
CPSF4-204ENST00000436336 MSX2P35548 267 aaPredicted RBP21.48■■□□□ 1.03
CPSF4-204ENST00000436336 FOXL2P58012 376 aa21.48■■□□□ 1.03
CPSF4-204ENST00000436336 CYP51A1Q16850 503 aa21.48■■□□□ 1.03
CPSF4-204ENST00000436336 IGF2-ASQ6U949 168 aa21.48■■□□□ 1.03
CPSF4-204ENST00000436336 TMEM151BQ8IW70 566 aa21.48■■□□□ 1.03
CPSF4-204ENST00000436336 GIMAP5Q96F15 307 aa21.48■■□□□ 1.03
CPSF4-204ENST00000436336 REXO5Q96IC2 774 aaKnown RBP21.48■■□□□ 1.03
CPSF4-204ENST00000436336 DCDC2BA2VCK2 349 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 BCAS2O75934 225 aaPredicted RBP21.47■■□□□ 1.03
CPSF4-204ENST00000436336 RAB40ALP0C0E4 278 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 BMP2P12643 396 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms