RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 STBD1O95210 358 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 P0C879 139 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 NCF1P14598 390 aaPredicted RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF17P17021 662 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 SRD5A2P31213 254 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 HNRNPFP52597 415 aaKnown RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 ERVPABLB-1P60509 514 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 GMFBP60983 142 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 SULT2A1Q06520 285 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 PDE7AQ13946 482 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 GK2Q14410 553 aaPredicted RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 C17orf58Q2M2W7 97 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 LRRC37A5PQ49AS3 106 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 LRRC38Q5VT99 294 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF770Q6IQ21 691 aaPredicted RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 OLFM4Q6UX06 510 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 NUFIP2Q7Z417 695 aaKnown RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 ERASQ7Z444 233 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 ANKRD46Q86W74 232 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 UBQLNLQ8IYU4 475 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 THEM5Q8N1Q8 247 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 ANKRD20A12PQ8NF67 263 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 LINC01006Q8NI28 216 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 PSMA8Q8TAA3 256 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 C16orf45Q96MC5 204 aaPredicted RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 TSGA13Q96PP4 275 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 IDI2Q9BXS1 227 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 HSD3B7Q9H2F3 369 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 DPH5Q9H2P9 285 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 RWDD1Q9H446 243 aaPredicted RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 RPF1Q9H9Y2 349 aaKnown RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 PLEKHA3Q9HB20 300 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 C3orf14Q9HBI5 128 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 MRPL17Q9NRX2 175 aaKnown RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 SLCO1C1Q9NYB5 712 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 PLA2G4CQ9UP65 541 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 AURKCQ9UQB9 309 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 AP1M2Q9Y6Q5 423 aa2.37□□□□□ -2.03
PTPN4-205ENST00000433888 SPAG9O60271 1321 aaKnown RBP2.37□□□□□ -2.03
PTPN4-205ENST00000433888 DHX29Q7Z478 1369 aaKnown RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 A0A087X0K7 114 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 A0A0U1RRA0 63 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 MACROD2A1Z1Q3 448 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 CFAP73A6NFT4 308 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 ANHXE9PGG2 379 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 PANO1I0J062 215 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 MPHOSPH10O00566 681 aaKnown RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 DIRAS3O95661 229 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 MOCS2O96007 188 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 CCDC192P0DO97 292 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 MDH2P40926 338 aaKnown RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 CDX1P47902 265 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 GPC3P51654 580 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 IL10RBQ08334 325 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 LCP2Q13094 533 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 FASTKQ14296 549 aaKnown RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 ACKR1Q16570 336 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 ECSCRQ19T08 205 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 ISXQ2M1V0 245 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 WSCD2Q2TBF2 565 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 TWISTNBQ3B726 338 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 FAM174BQ3ZCQ3 159 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 USH1GQ495M9 461 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 EPC2Q52LR7 807 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 Q71RC1 249 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 STHQ8IWL8 128 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 C4orf19Q8IY42 314 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 ELMOD2Q8IZ81 293 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 BATF2Q8N1L9 274 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 FAM104AQ969W3 186 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 NTNG2Q96CW9 530 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 SNRNP40Q96DI7 357 aaKnown RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 CXorf58Q96LI9 332 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 SAMD8Q96LT4 415 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 RASL10BQ96S79 203 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 MYCBPQ99417 103 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 MAPKAP1Q9BPZ7 522 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 ALKBH7Q9BT30 221 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 HES7Q9BYE0 225 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 DDX47Q9H0S4 455 aaKnown RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 SIRPDQ9H106 197 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 NAPBQ9H115 298 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 DPEP2Q9H4A9 486 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 DPEP3Q9H4B8 488 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 DCLRE1BQ9H816 532 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 PALMDQ9NP74 551 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 KCNMB3Q9NPA1 279 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 PRMT8Q9NR22 394 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 LEF1Q9UJU2 399 aaPredicted RBP2.36□□□□□ -2.03
PTPN4-205ENST00000433888 MGAT4AQ9UM21 535 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 EXOC7Q9UPT5 735 aa2.36□□□□□ -2.03
PTPN4-205ENST00000433888 ILVBLA1L0T0 632 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 MAGEB16A2A368 324 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 SLC15A5A6NIM6 579 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 CHUKO15111 745 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 SCO2O43819 266 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 AREGP15514 252 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 CTNNA2P26232 953 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms