RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 SMNDC1O75940 238 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 WISP2O76076 250 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZWINTO95229 277 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 RASAL1O95294 804 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 SP1P08047 785 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 FGF4P08620 206 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 SLC35E2P0CK97 266 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 EPXP11678 715 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 CPMP14384 443 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 PORP16435 677 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 CSNK2A2P19784 350 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 TACR1P25103 407 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 TIA1P31483 386 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 RFC3P40938 356 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 UQCRFS1P47985 274 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 SLC1A6P48664 564 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 SSR4P51571 173 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 HK2P52789 917 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 ABCE1P61221 599 aaKnown RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 TRA2BP62995 288 aaKnown RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 IGLV3-21P80748 117 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 MRPS35P82673 323 aaKnown RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 PLIN5Q00G26 463 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 DUSP2Q05923 314 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 STX3Q13277 289 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 BIKQ13323 160 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 MRPL49Q13405 166 aaKnown RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 EXOSC7Q15024 291 aaKnown RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 TERF2Q15554 542 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 RFTN2Q52LD8 501 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 SPIN4Q56A73 249 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 HLA-DQA1Q5Y7H0 255 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 KANK2Q63ZY3 851 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 SLC25A25Q6KCM7 469 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 ANKRD26P1Q6NSI1 321 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 NOXRED1Q6NXP6 359 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 TMEM64Q6YI46 380 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 RNF111Q6ZNA4 994 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 GALNTL5Q7Z4T8 443 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 MDGA2Q7Z553 956 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 ST13P4Q8IZP2 240 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 SVOPQ8N4V2 548 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 OR5L2Q8NGL0 311 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 OR5M3Q8NGP4 307 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 CLHC1Q8NHS4 586 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 GRHL3Q8TE85 626 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 NUDT8Q8WV74 236 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 TWIST2Q8WVJ9 160 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 ASB15Q8WXK1 588 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 KAT2AQ92830 837 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 MIB2Q96AX9 1013 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 ARL8AQ96BM9 186 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 CNRIP1Q96F85 164 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 MAGED4Q96JG8 741 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 C3orf30Q96M34 536 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 C5orf34Q96MH7 638 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 TAAR6Q96RI8 345 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 FAIM2Q9BWQ8 316 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 C20orf27Q9GZN8 174 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 OR10A5Q9H207 317 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 ANKRA2Q9H9E1 313 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 LRTM1Q9HBL6 345 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 SSU72Q9NP77 194 aaKnown RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 AGPAT4Q9NRZ5 378 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 PNPOQ9NVS9 261 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 C1orf109Q9NX04 203 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 FRRS1LQ9P0K9 344 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 MYOTQ9UBF9 498 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 CES1P1Q9UKY3 287 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 PSME2Q9UL46 239 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 PPIEQ9UNP9 301 aaKnown RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 YARS2Q9Y2Z4 477 aaKnown RBP5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 CCL27Q9Y4X3 112 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 ZNF780BQ9Y6R6 833 aa5.35□□□□□ -1.55
HMGB3P24-201ENST00000433260 C2orf92A0A1B0GVN3 265 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 J3QW42 95 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 TM9SF1O15321 606 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 BIRC5O15392 142 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 SLC25A12O75746 678 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 RGS9O75916 674 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 RSL1D1O76021 490 aaKnown RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 NEURL1O76050 574 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 OR6B1O95007 311 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 CBX6O95503 412 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 CLPSP04118 112 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 JUNP05412 331 aaKnown RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 KITP10721 976 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 DRD2P14416 443 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 EFNA1P20827 205 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 SOX3P41225 446 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 HLCSP50747 726 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 RPL14P50914 215 aaKnown RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 NR0B1P51843 470 aaKnown RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 SLC37A1P57057 533 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 GPR85P60893 370 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 RPL38P63173 70 aaKnown RBP5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 MGAT2Q10469 447 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 BST1Q10588 318 aa5.34□□□□□ -1.55
HMGB3P24-201ENST00000433260 HEPACAMQ14CZ8 416 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms