RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 GALNT12Q8IXK2 581 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 MMP21Q8N119 569 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 C17orf47Q8NEP4 570 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 MBD3L2Q8NHZ7 208 aaPredicted RBP13.62□□□□□ -0.23
PRKDC-203ENST00000432581 RHEBL1Q8TAI7 183 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 TMEM41AQ96HV5 264 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 GSX1Q9H4S2 264 aaPredicted RBP13.62□□□□□ -0.23
PRKDC-203ENST00000432581 CALHM2Q9HA72 323 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 CXorf21Q9HAI6 301 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 TEX10Q9NXF1 929 aaPredicted RBP13.62□□□□□ -0.23
PRKDC-203ENST00000432581 WHRNQ9P202 907 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 RNF14Q9UBS8 474 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 EML6Q6ZMW3 1958 aa13.62□□□□□ -0.23
PRKDC-203ENST00000432581 WASHC1A8K0Z3 465 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 EEF1E1-BLOC1S5C9J1V9 151 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 EEF1E1O43324 174 aaKnown RBP13.61□□□□□ -0.23
PRKDC-203ENST00000432581 SSTR4P31391 388 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 GMPRP36959 345 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 CASP3P42574 277 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 FUT7Q11130 342 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 SETDB1Q15047 1291 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 C6orf163Q5TEZ5 329 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 FNDC7Q5VTL7 733 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 BICRALQ6AI39 1079 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 CCDC91Q7Z6B0 441 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 BIVMQ86UB2 503 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 NUDT13Q86X67 352 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 WDYHV1Q96HA8 205 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 GNRHR2Q96P88 292 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 TRIB1Q96RU8 372 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 NAPGQ99747 312 aaPredicted RBP13.61□□□□□ -0.23
PRKDC-203ENST00000432581 ERP44Q9BS26 406 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 UGT2B28Q9BY64 529 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 EPB41L4BQ9H329 900 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 SLC6A5Q9Y345 797 aa13.61□□□□□ -0.23
PRKDC-203ENST00000432581 FAM187AA6NFU0 413 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 FOXE1O00358 373 aaPredicted RBP13.6□□□□□ -0.23
PRKDC-203ENST00000432581 MTHFD2P13995 350 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 GFAPP14136 432 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 BMP7P18075 431 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 KRT15P19012 456 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 PIK3R1P27986 724 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 GCKP35557 465 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 PIK3CGP48736 1102 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 GPX6P59796 221 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 GNG11P61952 73 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 NAB1Q13506 487 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 RCAN2Q14206 197 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 TOMM20Q15388 145 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 CPSF6Q16630 551 aaKnown RBP eCLIP13.6□□□□□ -0.23
PRKDC-203ENST00000432581 FAM83EQ2M2I3 478 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 KBTBD12Q3ZCT8 623 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 EIPR1Q53HC9 387 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 TIGD3Q6B0B8 471 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 PPM1NQ8N819 430 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 ZNF615Q8N8J6 731 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 OR7G1Q8NGA0 311 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 ABTB1Q969K4 478 aaPredicted RBP13.6□□□□□ -0.23
PRKDC-203ENST00000432581 ADIPOR1Q96A54 375 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 NXNL1Q96CM4 212 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 YIPF4Q9BSR8 244 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 OR10A5Q9H207 317 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 DPH5Q9H2P9 285 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 PLEKHF2Q9H8W4 249 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 JKAMPQ9P055 326 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 FETUBQ9UGM5 382 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 ACOT9Q9Y305 439 aa13.6□□□□□ -0.23
PRKDC-203ENST00000432581 HRNRQ86YZ3 2850 aaPredicted RBP13.6□□□□□ -0.23
PRKDC-203ENST00000432581 VPS13CQ709C8 3753 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 A0A087X1B8 175 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 CLCA1A8K7I4 914 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 PGRMC2O15173 223 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 SEMA3DO95025 777 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 ACTL6AO96019 429 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 CYP4B1P13584 511 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 NAGAP17050 411 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 ABCD3P28288 659 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 PTPN6P29350 595 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 STX2P32856 288 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 ALDH18A1P54886 795 aaKnown RBP13.59□□□□□ -0.23
PRKDC-203ENST00000432581 PCBP2Q15366 365 aaKnown RBP eCLIP13.59□□□□□ -0.23
PRKDC-203ENST00000432581 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 WIPI1Q5MNZ9 446 aaPredicted RBP13.59□□□□□ -0.23
PRKDC-203ENST00000432581 METTL2BQ6P1Q9 378 aaKnown RBP13.59□□□□□ -0.23
PRKDC-203ENST00000432581 TMEM81Q6P7N7 255 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 L3MBTL4Q8NA19 623 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 OR4K14Q8NGD5 310 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 OR1J4Q8NGS1 313 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 LINC01560Q8TB33 94 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 WDR20Q8TBZ3 569 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 ZPLD1Q8TCW7 415 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 NTNG2Q96CW9 530 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 ZFP3Q96NJ6 502 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 SERPINI1Q99574 410 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 METTL7AQ9H8H3 244 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 IPPKQ9H8X2 491 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 NEUROD4Q9HD90 331 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 CFL2Q9Y281 166 aa13.59□□□□□ -0.23
PRKDC-203ENST00000432581 TNPO3Q9Y5L0 923 aaKnown RBP13.59□□□□□ -0.23
PRKDC-203ENST00000432581 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms