RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ZNF555Q8NEP9 628 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 PROX1Q92786 737 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 OTUB1Q96FW1 271 aaPredicted RBP13.43□□□□□ -0.26
CALD1-207ENST00000430085 EPYCQ99645 322 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 GABARAPL1Q9H0R8 117 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 TOR3AQ9H497 397 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 SOX17Q9H6I2 414 aaPredicted RBP13.43□□□□□ -0.26
CALD1-207ENST00000430085 ZNF696Q9H7X3 374 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 PDP1Q9P0J1 537 aaPredicted RBP13.43□□□□□ -0.26
CALD1-207ENST00000430085 SEC14L3Q9UDX4 400 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 FAM32AQ9Y421 112 aaKnown RBP13.43□□□□□ -0.26
CALD1-207ENST00000430085 PCDHGB3Q9Y5G1 929 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 IGHV1OR21-1A0A087WYE8 117 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 A0A0A6YYC8 382 aaPredicted RBP13.43□□□□□ -0.26
CALD1-207ENST00000430085 DPPA5A6NC42 116 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 I3L1I5 382 aaPredicted RBP13.43□□□□□ -0.26
CALD1-207ENST00000430085 MFN2O95140 757 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 GPR75O95800 540 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 IFNW1P05000 195 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 ADARB1P78563 741 aaKnown RBP13.43□□□□□ -0.26
CALD1-207ENST00000430085 MAPK11Q15759 364 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 DUSP7Q16829 419 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 ZNF528Q3MIS6 628 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 AMZ1Q400G9 498 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 TCTE1Q5JU00 501 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 CEP68Q76N32 757 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 PLXDC1Q8IUK5 500 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 LGI4Q8N135 537 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 ARHGEF39Q8N4T4 335 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 PRSS33Q8NF86 280 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 OR7G2Q8NG99 324 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 BBS10Q8TAM1 723 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 C16orf58Q96GQ5 468 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 COL21A1Q96P44 957 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 MS4A4EQ96PG1 132 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 OR7D2Q96RA2 312 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 ZNF300Q96RE9 604 aaPredicted RBP13.43□□□□□ -0.26
CALD1-207ENST00000430085 SPATA5L1Q9BVQ7 753 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 ACTRT3Q9BYD9 372 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 CHRNA10Q9GZZ6 450 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 ANKRA2Q9H9E1 313 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 EXD2Q9NVH0 621 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 KIF17Q9P2E2 1029 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 TESMINQ9Y4I5 508 aa13.43□□□□□ -0.26
CALD1-207ENST00000430085 HYKKA2RU49 373 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 A6NHS1 94 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 FAM227AF5H4B4 570 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 CHST10O43529 356 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 ASNA1O43681 348 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 FGF17O60258 216 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 BMP10O95393 424 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 CLIC3O95833 236 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 NELFEP18615 380 aaKnown RBP13.42□□□□□ -0.26
CALD1-207ENST00000430085 IGFBP5P24593 272 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 GPR3P46089 330 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 ARL4DP49703 201 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 SPIBQ01892 262 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 BNC1Q01954 994 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 KCNC4Q03721 635 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 LAPTM4AQ15012 233 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 GPAT3Q53EU6 434 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 ATAD3BQ5T9A4 648 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 TTC23Q5W5X9 447 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 TTC33Q6PID6 262 aaPredicted RBP13.42□□□□□ -0.26
CALD1-207ENST00000430085 OFCC1Q8IZS5 231 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 Q8N9G6 341 aaPredicted RBP13.42□□□□□ -0.26
CALD1-207ENST00000430085 TMEM52Q8NDY8 209 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 RMND5BQ96G75 393 aaPredicted RBP13.42□□□□□ -0.26
CALD1-207ENST00000430085 PTGFRNQ9P2B2 879 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 PILRBQ9UKJ0 227 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 MYRFQ9Y2G1 1151 aa13.42□□□□□ -0.26
CALD1-207ENST00000430085 PRAMEF27A3QJZ7 478 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 TNFRSF11BO00300 401 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 SEC24DO94855 1032 aaPredicted RBP13.41□□□□□ -0.26
CALD1-207ENST00000430085 H6PDO95479 791 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 ATP1B1P05026 303 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 FESP07332 822 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 CD247P20963 164 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 NT5EP21589 574 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 YAP1P46937 504 aaKnown RBP13.41□□□□□ -0.26
CALD1-207ENST00000430085 GPLD1P80108 840 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 TCF15Q12870 199 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 FAM53BQ14153 422 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 SHBQ15464 509 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 GARNL3Q5VVW2 1013 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 ANKRD34AQ69YU3 496 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 FAM111BQ6SJ93 734 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 CARFQ8N187 725 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 OR2L13Q8N349 312 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 ADAMTS15Q8TE58 950 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 PIGKQ92643 395 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 ZNF285Q96NJ3 590 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 BARD1Q99728 777 aaKnown RBP13.41□□□□□ -0.26
CALD1-207ENST00000430085 BCL2L10Q9HD36 194 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 NTMQ9P121 344 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 LIPT1Q9Y234 373 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 A0A0G2JPF8 293 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 DUXAA6NLW8 204 aa13.41□□□□□ -0.26
CALD1-207ENST00000430085 HNRNPCL2B2RXH8 293 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms