RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 IGFN1Q86VF2 1251 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 FAM20CQ8IXL6 584 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 IL17RCQ8NAC3 791 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 B3GNT7Q8NFL0 401 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 NR4A3Q92570 626 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 UCN3Q969E3 161 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 GAL3ST3Q96A11 431 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SIPA1Q96FS4 1042 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 FNDC11Q9BVV2 318 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 CDCA4Q9BXL8 241 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 ROGDIQ9GZN7 287 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SLC6A17Q9H1V8 727 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 C3orf14Q9HBI5 128 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 AMBNQ9NP70 447 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 CALML5Q9NZT1 146 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SELENONQ9NZV5 590 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 SCHIP1Q9P0W5 487 aaPredicted RBP12.92□□□□□ -0.34
THBS3-202ENST00000428962 NDOR1Q9UHB4 597 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 FBXW2Q9UKT8 454 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 ATG4BQ9Y4P1 393 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 ZNF780BQ9Y6R6 833 aa12.92□□□□□ -0.34
THBS3-202ENST00000428962 A0A1W2PQF6 199 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 GLOD5A6NK44 160 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 C4orf51C9J302 202 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 EMC8O43402 210 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 ASNA1O43681 348 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 PRKRAO75569 313 aaKnown RBP12.91□□□□□ -0.34
THBS3-202ENST00000428962 STATHP02808 62 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 ASGR2P07307 311 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 CD72P21854 359 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 LIPAP38571 399 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 PRKAG1P54619 331 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 ALDH6A1Q02252 535 aaKnown RBP12.91□□□□□ -0.34
THBS3-202ENST00000428962 LASP1Q14847 261 aaKnown RBP12.91□□□□□ -0.34
THBS3-202ENST00000428962 PGBD2Q6P3X8 592 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 CASP12Q6UXS9 341 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 USP43Q70EL4 1123 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 SLC46A3Q7Z3Q1 461 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 PAQR7Q86WK9 346 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 NRROSQ86YC3 692 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 GJD3Q8N144 294 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 KBTBD8Q8NFY9 601 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 CHPT1Q8WUD6 406 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 WDR92Q96MX6 357 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 GAS2L1Q99501 681 aaPredicted RBP12.91□□□□□ -0.34
THBS3-202ENST00000428962 TRIM45Q9H8W5 580 aaPredicted RBP12.91□□□□□ -0.34
THBS3-202ENST00000428962 REV1Q9UBZ9 1251 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 TBC1D29Q9UFV1 150 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 OSGIN1Q9UJX0 560 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 CORINQ9Y5Q5 1042 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 TICRRQ7Z2Z1 1910 aa12.91□□□□□ -0.34
THBS3-202ENST00000428962 H3BN98 237 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 M0R082 166 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 PGRMC2O15173 223 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 ADAM23O75077 832 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 NME6O75414 186 aaPredicted RBP12.9□□□□□ -0.34
THBS3-202ENST00000428962 APBB3O95704 486 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 HMGN2P05204 90 aaKnown RBP12.9□□□□□ -0.34
THBS3-202ENST00000428962 OCM2P0CE71 109 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 OCMP0CE72 109 aaPredicted RBP12.9□□□□□ -0.34
THBS3-202ENST00000428962 NR2F6P10588 404 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 ACADMP11310 421 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 HOXB3P14651 431 aaPredicted RBP12.9□□□□□ -0.34
THBS3-202ENST00000428962 COL9A1P20849 921 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 CTHP32929 405 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 IDUAP35475 653 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 XKP51811 444 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.9□□□□□ -0.34
THBS3-202ENST00000428962 COX10Q12887 443 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 FOXD4Q12950 439 aaPredicted RBP12.9□□□□□ -0.34
THBS3-202ENST00000428962 KIR2DS3Q14952 304 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 SEC23BQ15437 767 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 GPR19Q15760 415 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 SYT16Q17RD7 645 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 TMEM201Q5SNT2 666 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 TMEM236Q5W0B7 351 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 ENPP7Q6UWV6 458 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 OR4E2Q8NGC2 313 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 OR6Q1Q8NGQ2 317 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 NT5CQ8TCD5 201 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 OR1E3Q8WZA6 343 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 CNRIP1Q96F85 164 aaPredicted RBP12.9□□□□□ -0.34
THBS3-202ENST00000428962 PRRC1Q96M27 445 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 MACROD1Q9BQ69 325 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 FUZQ9BT04 418 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 PINK1Q9BXM7 581 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 POLR2J3Q9H1A7 115 aaKnown RBP12.9□□□□□ -0.34
THBS3-202ENST00000428962 DCSTAMPQ9H295 470 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 SRMSQ9H3Y6 488 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 APOBEC3BQ9UH17 382 aaKnown RBP12.9□□□□□ -0.34
THBS3-202ENST00000428962 CES1P1Q9UKY3 287 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 PCOLCE2Q9UKZ9 415 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 A4GNTQ9UNA3 340 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 CHD9Q3L8U1 2897 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 PRAMEF27A3QJZ7 478 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 FAM227AF5H4B4 570 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 M0R129 80 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 M0R3H8 397 aa12.9□□□□□ -0.34
THBS3-202ENST00000428962 SYT5O00445 386 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms