RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 HMGN4O00479 90 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 POLR1CO15160 346 aaPredicted RBP8.3□□□□□ -1.08
SMC6-204ENST00000428868 EMC8O43402 210 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 CTNSO60931 367 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 DKK1O94907 266 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 CBX7O95931 251 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 MT-CO3P00414 261 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 CLPSP04118 112 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 ATP1B1P05026 303 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 HMGN2P05204 90 aaKnown RBP8.3□□□□□ -1.08
SMC6-204ENST00000428868 C8BP07358 591 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 OR12D1P0DN82 309 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 ARAFP10398 606 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 ACP2P11117 423 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 S1PR1P21453 382 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 MPIP34949 423 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 MAN2A2P49641 1150 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 POLE2P56282 527 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 SKP1P63208 163 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 MAP7Q14244 749 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 PUM1Q14671 1186 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMC6-204ENST00000428868 LASP1Q14847 261 aaKnown RBP8.3□□□□□ -1.08
SMC6-204ENST00000428868 RCN1Q15293 331 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 VMACQ2NL98 169 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 MINDY4Q4G0A6 757 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMC6-204ENST00000428868 NKAIN1Q4KMZ8 207 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 GCNT6Q5T4J0 391 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 C6orf163Q5TEZ5 329 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 MFSD4BQ5TF39 518 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 YOD1Q5VVQ6 348 aaPredicted RBP8.3□□□□□ -1.08
SMC6-204ENST00000428868 NIPAL1Q6NVV3 410 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 FAM199XQ6PEV8 388 aaPredicted RBP8.3□□□□□ -1.08
SMC6-204ENST00000428868 ENPP6Q6UWR7 440 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 LANCL3Q6ZV70 420 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 RAB11FIP2Q7L804 512 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 SERPINA11Q86U17 422 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 DHFR2Q86XF0 187 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 ZNF595Q8IYB9 648 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 ADGRG5Q8IZF4 528 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 TRIML2Q8N7C3 387 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 ZNF321PQ8N8H1 164 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 NUP43Q8NFH3 380 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 NFKBIDQ8NI38 313 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 SLC26A7Q8TE54 656 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 PTCHD1Q96NR3 888 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 SH3GL1Q99961 368 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 ALOXE3Q9BYJ1 711 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 SLC7A5P2Q9GIP4 190 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 VN1R1Q9GZP7 353 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 SOX17Q9H6I2 414 aaPredicted RBP8.3□□□□□ -1.08
SMC6-204ENST00000428868 S100A14Q9HCY8 104 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 ADAP2Q9NPF8 381 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 SLC39A1Q9NY26 324 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 ACTR3BQ9P1U1 418 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 PISDQ9UG56 409 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 PSME2Q9UL46 239 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 DTX4Q9Y2E6 619 aa8.3□□□□□ -1.08
SMC6-204ENST00000428868 KNTC1P50748 2209 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 IGLV3-12A0A075B6K2 115 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 IGHV3-20A0A0C4DH32 117 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 FAM149AA5PLN7 773 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 TMEM229AB2RXF0 380 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 B4E171 279 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 C9orf172C9J069 976 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 PLOD2O00469 737 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 GSTA4O15217 222 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 CPNE3O75131 537 aaKnown RBP8.29□□□□□ -1.08
SMC6-204ENST00000428868 CREG1O75629 220 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 KRT75O95678 551 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 MT-ND1P03886 318 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 OPN1SWP03999 348 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 FTH1P19P0C7X4 201 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 SLC35E2P0CK97 266 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 BMP2P12643 396 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 DDX5P17844 614 aaKnown RBP8.29□□□□□ -1.08
SMC6-204ENST00000428868 MATN1P21941 496 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 PPIBP23284 216 aaKnown RBP8.29□□□□□ -1.08
SMC6-204ENST00000428868 AQP1P29972 269 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 SSTR4P31391 388 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 PCGF2P35227 344 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 TSPAN7P41732 249 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 HSD17B7P56937 341 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 DSTNP60981 165 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 E2F1Q01094 437 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 STX4Q12846 297 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 FADDQ13158 208 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 ILKQ13418 452 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 RIPK1Q13546 671 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 SYPL1Q16563 259 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 SPATS1Q496A3 300 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 EXOSC6Q5RKV6 272 aaKnown RBP8.29□□□□□ -1.08
SMC6-204ENST00000428868 FAAH2Q6GMR7 532 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 MFSD12Q6NUT3 480 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 FAM198BQ6UWH4 519 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 CEACAM20Q6UY09 585 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 QSOX2Q6ZRP7 698 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 HMGN2P46Q86SG4 172 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 GLRX5Q86SX6 157 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 LSRQ86X29 649 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms