RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 NPC1L1Q9UHC9 1359 aa4.98□□□□□ -1.61
LINC00348-201ENST00000428761 CHD6Q8TD26 2715 aa4.98□□□□□ -1.61
LINC00348-201ENST00000428761 FAM240BA0A1B0GVZ2 78 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 PDXKO00764 312 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 SLC22A2O15244 555 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 GMNNO75496 209 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 STBD1O95210 358 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 YEATS4O95619 227 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 BAG3O95817 575 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 BMP15O95972 392 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 IVLP07476 585 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 HOXC6P09630 235 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 NEFHP12036 1026 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 PRKACBP22694 351 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 DGKAP23743 735 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 PRDX2P32119 198 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 CHI3L1P36222 383 aaPredicted RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 RGS4P49798 205 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 FKBP1BP68106 108 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 MYBPC1Q00872 1141 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 MBTD1Q05BQ5 628 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 SLC3A1Q07837 685 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 FUT7Q11130 342 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 DNAJC3Q13217 504 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 TWIST1Q15672 202 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 ZC2HC1CQ53FD0 456 aaPredicted RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 ASPRV1Q53RT3 343 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 XKR3Q5GH77 459 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 TTC19Q6DKK2 380 aaPredicted RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 AWAT2Q6E213 333 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 FAM171BQ6P995 826 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 PRUNE1Q86TP1 453 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 FJX1Q86VR8 437 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 ADHFE1Q8IWW8 467 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 UBQLNLQ8IYU4 475 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 THEM5Q8N1Q8 247 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 MUC20Q8N307 709 aaPredicted RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 SLC43A2Q8N370 569 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 PRSS35Q8N3Z0 413 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 C9orf106Q8NAJ2 232 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 OLIG1Q8TAK6 271 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 SLC2A14Q8TDB8 520 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 CHPT1Q8WUD6 406 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 HAS2Q92819 552 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 TSACCQ96A04 125 aaPredicted RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 LRR1Q96L50 414 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 C17orf77Q96MU5 243 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 ZNF385AQ96PM9 386 aaKnown RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 RTP3Q9BQQ7 232 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 TRAF4Q9BUZ4 470 aaPredicted RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 NUP58Q9BVL2 599 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 CCDC94Q9BW85 323 aaPredicted RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 CSTL1Q9H114 145 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 RIMS4Q9H426 269 aaPredicted RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 DCLRE1BQ9H816 532 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 APMAPQ9HDC9 416 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 A4GALTQ9NPC4 353 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 FAM120CQ9NX05 1096 aaKnown RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 VPS54Q9P1Q0 977 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 KMT2BQ9UMN6 2715 aaPredicted RBP4.97□□□□□ -1.61
LINC00348-201ENST00000428761 CRB1P82279 1406 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 CASKIN1Q8WXD9 1431 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 PHLPP2Q6ZVD8 1323 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 TTC21AQ8NDW8 1320 aa4.97□□□□□ -1.61
LINC00348-201ENST00000428761 CKAP5Q14008 2032 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 A0A1B0GTQ1 180 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 ANTXRLA6NF34 631 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 MEI4A8MW99 385 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 M0R296 226 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 ZNF197O14709 1029 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 NME2P1O60361 137 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 OR4F21O95013 312 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 APOHP02749 345 aaPredicted RBP4.96□□□□□ -1.62
LINC00348-201ENST00000428761 RAF1P04049 648 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 CA3P07451 260 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 SFTPBP07988 381 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 NUDT17P0C025 328 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 PABPC4LP0CB38 370 aaKnown RBP4.96□□□□□ -1.62
LINC00348-201ENST00000428761 ZCCHC18P0CG32 403 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 SLC2A3P11169 496 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 F3P13726 295 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 DPEP1P16444 411 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 CHMLP26374 656 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 PPP2R1AP30153 589 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 DLSTP36957 453 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 SYKP43405 635 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 CDKN1BP46527 198 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 ACADVLP49748 655 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 CCL11P51671 97 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 B3GALT5-AS1P59052 145 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 PITX1P78337 314 aaPredicted RBP4.96□□□□□ -1.62
LINC00348-201ENST00000428761 RPP38P78345 283 aaKnown RBP4.96□□□□□ -1.62
LINC00348-201ENST00000428761 RPL24P83731 157 aaKnown RBP4.96□□□□□ -1.62
LINC00348-201ENST00000428761 DLG1Q12959 904 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 IL18Q14116 193 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 RFTN1Q14699 578 aaPredicted RBP4.96□□□□□ -1.62
LINC00348-201ENST00000428761 POM121L1PQ3SYA9 428 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 TMEM31Q5JXX7 168 aa4.96□□□□□ -1.62
LINC00348-201ENST00000428761 TTC23Q5W5X9 447 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms