RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 CDK15Q96Q40 435 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 CENPKQ9BS16 269 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 UGT2B28Q9BY64 529 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 UBQLN3Q9H347 655 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 DDX31Q9H8H2 851 aaKnown RBP15.13■□□□□ 0.01
VARS-216ENST00000428445 ACTR8Q9H981 624 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 CXorf21Q9HAI6 301 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.13■□□□□ 0.01
VARS-216ENST00000428445 DTX4Q9Y2E6 619 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 TUBAL3A6NHL2 446 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 RAD51CO43502 376 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 SIX3O95343 332 aaPredicted RBP15.12■□□□□ 0.01
VARS-216ENST00000428445 HPNP05981 417 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 SLC35E2P0CK97 266 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 CASP3P42574 277 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 SLCO1A2P46721 670 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 MASP1P48740 699 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 NAGLUP54802 743 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 FOXF2Q12947 444 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 DAZAP2Q15038 168 aaPredicted RBP15.12■□□□□ 0.01
VARS-216ENST00000428445 RPS6KA2Q15349 733 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 LIPJQ5W064 366 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 NSUN5P2Q63ZY6 315 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 VASNQ6EMK4 673 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 PAMR1Q6UXH9 720 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 GOLGA7Q7Z5G4 137 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 CCDC25Q86WR0 208 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 LACC1Q8IV20 430 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 CENPLQ8N0S6 344 aaPredicted RBP15.12■□□□□ 0.01
VARS-216ENST00000428445 ZNF615Q8N8J6 731 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 C9orf106Q8NAJ2 232 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 SIMC1Q8NDZ2 872 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 RHEBL1Q8TAI7 183 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 PELOQ9BRX2 385 aaKnown RBP15.12■□□□□ 0.01
VARS-216ENST00000428445 ANGPTL4Q9BY76 406 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 PRDM14Q9GZV8 571 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 OR10A5Q9H207 317 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 GRPEL1Q9HAV7 217 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 ZNF629Q9UEG4 869 aaPredicted RBP15.12■□□□□ 0.01
VARS-216ENST00000428445 PCDHGA11Q9Y5H2 935 aa15.12■□□□□ 0.01
VARS-216ENST00000428445 ANKRD33BA6NCL7 494 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 OR6C76A6NM76 312 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 SYCE1LA8MT33 242 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 EEF1E1-BLOC1S5C9J1V9 151 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 TP53I11O14683 189 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 EEF1E1O43324 174 aaKnown RBP15.11■□□□□ 0.01
VARS-216ENST00000428445 ATE1O95260 518 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 EPXP11678 715 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 GFAPP14136 432 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 GALNSP34059 522 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 C2orf54Q08AI8 447 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 NAB1Q13506 487 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 GTF2H2Q13888 395 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 SETDB1Q15047 1291 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 FBXL19-AS1Q494R0 122 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 MROH9Q5TGP6 573 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 HLA-DQA1Q5Y7H0 255 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 GTF2H2CQ6P1K8 395 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 METTL2BQ6P1Q9 378 aaKnown RBP15.11■□□□□ 0.01
VARS-216ENST00000428445 FAM111BQ6SJ93 734 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 PACS2Q86VP3 889 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 WDR20Q8TBZ3 569 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 SLC44A1Q8WWI5 657 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 ABTB1Q969K4 478 aaPredicted RBP15.11■□□□□ 0.01
VARS-216ENST00000428445 TP53INP1Q96A56 240 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 ALPK1Q96QP1 1244 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 PLEKHF2Q9H8W4 249 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 IPPKQ9H8X2 491 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 LYARQ9NX58 379 aaKnown RBP15.11■□□□□ 0.01
VARS-216ENST00000428445 MTRF1LQ9UGC7 380 aaKnown RBP15.11■□□□□ 0.01
VARS-216ENST00000428445 C15orf41Q9Y2V0 281 aa15.11■□□□□ 0.01
VARS-216ENST00000428445 A0A1W2PPR1 153 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 HMX2A2RU54 273 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 H0YIV9 168 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 UGDHO60701 494 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 RAF1P04049 648 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 C2P06681 752 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 KLK1P06870 262 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 S1PR1P21453 382 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 NT5EP21589 574 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 CTSSP25774 331 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 PIK3R1P27986 724 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 XKP51811 444 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 PLTPP55058 493 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 FUT7Q11130 342 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 KEAP1Q14145 624 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 DEFB113Q30KQ7 82 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 TBCELQ5QJ74 424 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 FAM180BQ6P0A1 224 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 VWA5B2Q8N398 1253 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 FAM83FQ8NEG4 500 aaPredicted RBP15.1■□□□□ 0.01
VARS-216ENST00000428445 SPATA4Q8NEY3 305 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 RDH11Q8TC12 318 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 NODALQ96S42 347 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 NXF5Q9H1B4 397 aaKnown RBP15.1■□□□□ 0.01
VARS-216ENST00000428445 WDR41Q9HAD4 459 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 GALNT9Q9HCQ5 603 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 SNX15Q9NRS6 342 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 EHD3Q9NZN3 535 aa15.1■□□□□ 0.01
VARS-216ENST00000428445 CPSF2Q9P2I0 782 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms