RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 MS4A12Q9NXJ0 267 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 GPRC5BQ9NZH0 403 aa12.86□□□□□ -0.35
HDAC6-206ENST00000426196 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-206ENST00000426196 RTCAO00442 366 aaKnown RBP12.85□□□□□ -0.35
HDAC6-206ENST00000426196 HS3ST1O14792 307 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 SCELO95171 688 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 AHSGP02765 367 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 TLX1P31314 330 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-206ENST00000426196 GDF5P43026 501 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 PGGT1BP53609 377 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 RPS4XP62701 263 aaKnown RBP12.85□□□□□ -0.35
HDAC6-206ENST00000426196 OCRLQ01968 901 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 KCTD19Q17RG1 926 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-206ENST00000426196 AAGABQ6PD74 315 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 ZNF474Q6S9Z5 364 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-206ENST00000426196 UBE3DQ7Z6J8 389 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 MILR1Q7Z6M3 343 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 RIT1Q92963 219 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 G6PC3Q9BUM1 346 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 PHACTR1Q9C0D0 580 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 OPN3Q9H1Y3 402 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-206ENST00000426196 WWOXQ9NZC7 414 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 PTBP2Q9UKA9 531 aaKnown RBP12.85□□□□□ -0.35
HDAC6-206ENST00000426196 IKZF3Q9UKT9 509 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 CORO1CQ9ULV4 474 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-206ENST00000426196 RNF112Q9ULX5 631 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 DLGAP4Q9Y2H0 992 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 OARD1Q9Y530 152 aa12.85□□□□□ -0.35
HDAC6-206ENST00000426196 NPEPPSL1A6NEC2 478 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 LRRC14BA6NHZ5 514 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 CLGNO14967 610 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 HCRTR2O43614 444 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 TGM6O95932 706 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 MAGEA3P43357 314 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 SLC6A12P48065 614 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 RPS13P62277 151 aaKnown RBP12.84□□□□□ -0.35
HDAC6-206ENST00000426196 FUT7Q11130 342 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 CRYMQ14894 314 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 TMEM35AQ53FP2 167 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 PAGE2BQ5JRK9 111 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 FAM45BPQ6NSW5 357 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 SH2D5Q6ZV89 423 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 CHMP1BQ7LBR1 199 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 FAM45AQ8TCE6 357 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 CTHRC1Q96CG8 243 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 DTNBP1Q96EV8 351 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 ZNF845Q96IR2 970 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-206ENST00000426196 EFCAB11Q9BUY7 163 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 MS4A8Q9BY19 250 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 OR2B2Q9GZK3 357 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 SERHLQ9NQF3 203 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 PHF11Q9UIL8 331 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 LAMP3Q9UQV4 416 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 VWA7Q9Y334 891 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 ALPK2Q86TB3 2170 aa12.84□□□□□ -0.35
HDAC6-206ENST00000426196 FREM1Q5H8C1 2179 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 SLC22A20A6NK97 555 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 RHOXF2BP0C7M4 288 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 ZNF37AP17032 561 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-206ENST00000426196 PGAM1P18669 254 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 ABCD3P28288 659 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 LHX2P50458 406 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 SIRPAP78324 504 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 TNFRSF17Q02223 184 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 SLAMF1Q13291 335 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 HIST2H2ACQ16777 129 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-206ENST00000426196 C18orf21Q32NC0 220 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-206ENST00000426196 ANKRD34AQ69YU3 496 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 HIST2H2AA3Q6FI13 130 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 SLC30A6Q6NXT4 461 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 GALNT7Q86SF2 657 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 ADAMTSL2Q86TH1 951 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 CNTN4Q8IWV2 1026 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 PRR22Q8IZ63 422 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 AGGF1Q8N302 714 aaeCLIP12.83□□□□□ -0.36
HDAC6-206ENST00000426196 RDH11Q8TC12 318 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 RHBDF1Q96CC6 855 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 PTCD3Q96EY7 689 aaKnown RBP12.83□□□□□ -0.36
HDAC6-206ENST00000426196 SIGLEC10Q96LC7 697 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 OSBPL11Q9BXB4 747 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 KLHL4Q9C0H6 718 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 TAS2R10Q9NYW0 307 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 ZNF490Q9ULM2 529 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-206ENST00000426196 EXO1Q9UQ84 846 aaKnown RBP12.83□□□□□ -0.36
HDAC6-206ENST00000426196 SVEP1Q4LDE5 3571 aa12.83□□□□□ -0.36
HDAC6-206ENST00000426196 YLPM1P49750 1951 aaKnown RBP12.82□□□□□ -0.36
HDAC6-206ENST00000426196 CBR3O75828 277 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 FGGP02679 453 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 CLPSP04118 112 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 PPP3CBP16298 524 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 TBXA2RP21731 343 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 SSTR4P31391 388 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 GALNSP34059 522 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 BUD31P41223 144 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-206ENST00000426196 STARP49675 285 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 GFRA1P56159 465 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 LAPTM5Q13571 262 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 DOC2AQ14183 400 aa12.82□□□□□ -0.36
HDAC6-206ENST00000426196 FGFBP1Q14512 234 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms