RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 RNFT1Q5M7Z0 435 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 C3P1Q6ZMU1 363 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 Q6ZPB1 254 aaPredicted RBP11.74□□□□□ -0.53
SGCE-203ENST00000425444 GK5Q6ZS86 529 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 GALNT12Q8IXK2 581 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 C1orf52Q8N6N3 182 aaKnown RBP11.74□□□□□ -0.53
SGCE-203ENST00000425444 OR4K14Q8NGD5 310 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 EPS8L3Q8TE67 593 aaKnown RBP11.74□□□□□ -0.53
SGCE-203ENST00000425444 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.74□□□□□ -0.53
SGCE-203ENST00000425444 CCDC126Q96EE4 140 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 FAIM2Q9BWQ8 316 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 SACM1LQ9NTJ5 587 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 COQ3Q9NZJ6 369 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 VPS29Q9UBQ0 182 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 ZNF225Q9UK10 706 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 HCFC1P51610 2035 aa11.74□□□□□ -0.53
SGCE-203ENST00000425444 C1orf226A1L170 272 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 GOLGA6L10A6NI86 522 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 OR6C76A6NM76 312 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 FAM166BA8MTA8 275 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 COPEO14579 308 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 PRRG2O14669 202 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 ZNHIT1O43257 154 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 ULK1O75385 1050 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 CRCPO75575 148 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 ERAL1O75616 437 aaKnown RBP11.73□□□□□ -0.53
SGCE-203ENST00000425444 C8BP07358 591 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 HSD3B1P14060 373 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 HSD3B2P26439 372 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 GALNSP34059 522 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 CCT5P48643 541 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 ALDH9A1P49189 494 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 XKP51811 444 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 PKNOX1P55347 436 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 ADAM8P78325 824 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 GALNT1Q10472 559 aaPredicted RBP11.73□□□□□ -0.53
SGCE-203ENST00000425444 TBL3Q12788 808 aaKnown RBP11.73□□□□□ -0.53
SGCE-203ENST00000425444 MYBPHQ13203 477 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 MPEG1Q2M385 716 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 CCDC153Q494R4 210 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 PIGGQ5H8A4 983 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 HLA-DQA1Q5Y7H0 255 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 ZYG11AQ6WRX3 759 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 FAM47EQ6ZV65 393 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 TDRPQ86YL5 185 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 ZFP62Q8NB50 900 aaPredicted RBP11.73□□□□□ -0.53
SGCE-203ENST00000425444 GOLM1Q8NBJ4 401 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 OR2M7Q8NG81 312 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 C16orf52Q8NHV5 167 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 AGAP11Q8TF27 550 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 KLHL29Q96CT2 875 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 L3HYPDHQ96EM0 354 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 SGCZQ96LD1 299 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 FAM173AQ9BQD7 235 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 WWTR1Q9GZV5 400 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 MID1IP1Q9NPA3 183 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 PFDN4Q9NQP4 134 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 EMCNQ9ULC0 261 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 GRID1Q9ULK0 1009 aa11.73□□□□□ -0.53
SGCE-203ENST00000425444 A0A0G2JMM0 328 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 A0A1W2PPB8 328 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 GNG14A0A1W2PPG7 69 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 A0A1W2PRS3 328 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 A0A1W2PS29 197 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 PINLYPA6NC86 204 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 KIR3DP1A8MWS1 328 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 PCDH7O60245 1069 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 ZNF354AO60765 605 aaPredicted RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 CDH16O75309 829 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 PROCP04070 461 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 ENO1P06733 434 aaKnown RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 TPOP07202 933 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 CCL3P10147 92 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 CPMP14384 443 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 PORP16435 677 aaPredicted RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 ADSLP30566 484 aaPredicted RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 SSTR4P31391 388 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 PTGS2P35354 604 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 HTR6P50406 440 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 SLC37A1P57057 533 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 ACSM2AQ08AH3 577 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 EBPQ15125 230 aaKnown RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 IMPG1Q17R60 797 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 SPIN4Q56A73 249 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 CMPK2Q5EBM0 449 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 CFAP157Q5JU67 520 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 ACSM2BQ68CK6 577 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 SLC48A1Q6P1K1 146 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 CLEC9AQ6UXN8 241 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 SLC22A16Q86VW1 577 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 TAGAPQ8N103 731 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 EID3Q8N140 333 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 C4orf33Q8N1A6 199 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 GBP7Q8N8V2 638 aaPredicted RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 FAM13CQ8NE31 585 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 PHF10Q8WUB8 498 aaKnown RBP11.72□□□□□ -0.53
SGCE-203ENST00000425444 NUDT8Q8WV74 236 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 KCNA7Q96RP8 456 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 TTTY12Q9BZ98 90 aa11.72□□□□□ -0.53
SGCE-203ENST00000425444 ACPTQ9BZG2 426 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms