RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 MAP4K2Q12851 820 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 MPP2Q14168 576 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 EXOSC7Q15024 291 aaKnown RBP20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GALNTL6Q49A17 601 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 HLA-DQA1Q5Y7H0 255 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CLEC18BQ6UXF7 455 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GFRALQ6UXV0 394 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 Q6ZSR9 355 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SULF2Q8IWU5 870 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 HOMEZQ8IX15 550 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CCDC116Q8IYX3 515 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SAMD14Q8IZD0 417 aaPredicted RBP20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF615Q8N8J6 731 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ANKRD42Q8N9B4 389 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CLEC18CQ8NCF0 446 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 OR7G1Q8NGA0 311 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SLC35C2Q9NQQ7 365 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SEC14L3Q9UDX4 400 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 BCAP29Q9UHQ4 241 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 KLRC4-KLRK1H3BQV0 150 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 LSM1O15116 133 aaKnown RBP20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PEX1O43933 1283 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SKAP2O75563 359 aaPredicted RBP20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 LYPLA1O75608 230 aaPredicted RBP20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 AGFG2O95081 481 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 UNC5CO95185 931 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 HSPA4LO95757 839 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 RFC3P40938 356 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 MRPS35P82673 323 aaKnown RBP20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 MGAT2Q10469 447 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 KIAA0040Q15053 153 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 UGT3A2Q3SY77 523 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CES4AQ5XG92 561 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 FAM71E1Q6IPT2 247 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TICAM1Q8IUC6 712 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF441Q8N8Z8 693 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZDHHC2Q9UIJ5 367 aa20.63■□□□□ 0.89
PTCHD3P2-201ENST00000424937 USP9XQ93008 2570 aaPredicted RBP20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GTF3C1Q12789 2109 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NINQ8N4C6 2090 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 G3V3Y1 287 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ITM2AO43736 263 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SEMA7AO75326 666 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PCSK2P16519 638 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 S1PR1P21453 382 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TACR1P25103 407 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NR0B1P51843 470 aaKnown RBP20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CASP8Q14790 479 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 IKBIPQ70UQ0 350 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SLC15A4Q8N697 577 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GOLM1Q8NBJ4 401 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 OR9A2Q8NGT5 310 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 C16orf52Q8NHV5 167 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF675Q8TD23 568 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SPACA9Q96E40 222 aaPredicted RBP20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 BBS4Q96RK4 519 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CCT7Q99832 543 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 PAIP2Q9BPZ3 127 aaKnown RBP20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 DEPPQ9NTK1 212 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GIMAP2Q9UG22 337 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 OSGIN2Q9Y236 505 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 LRRK2Q5S007 2527 aa20.62■□□□□ 0.89
PTCHD3P2-201ENST00000424937 DIDO1Q9BTC0 2240 aaKnown RBP20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 A0A0G2JMM0 328 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 A0A1W2PPB8 328 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 A0A1W2PRS3 328 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 KIR3DP1A8MWS1 328 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TMEM114B3SHH9 223 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NPIPA5E9PKD4 350 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CBX7O95931 251 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SDC1P18827 310 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 BGNP21810 368 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 GPX3P22352 226 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SOX18P35713 384 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 DUSP8Q13202 625 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NNATQ16517 81 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF791Q3KP31 576 aaPredicted RBP20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 RFTN2Q52LD8 501 aaPredicted RBP20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TRMT12Q53H54 448 aaKnown RBP20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF628Q5EBL2 1059 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 XKR7Q5GH72 579 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 RNFT1Q5M7Z0 435 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 HHATQ5VTY9 493 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 LYPD8Q6UX82 237 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 FAM9CQ8IZT9 166 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 TAGAPQ8N103 731 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 POGLUT1Q8NBL1 392 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SIMC1Q8NDZ2 872 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 OR52R1Q8NGF1 315 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 KAT2AQ92830 837 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CTHRC1Q96CG8 243 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 EGLN2Q96KS0 407 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 FCRL1Q96LA6 429 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SGCZQ96LD1 299 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF639Q9UID6 485 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NPIPA1Q9UND3 350 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CFL2Q9Y281 166 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 DTX4Q9Y2E6 619 aa20.61■□□□□ 0.89
PTCHD3P2-201ENST00000424937 WBP11Q9Y2W2 641 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms