RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 KRT12Q99456 494 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 CCL19Q99731 98 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 TM9SF2Q99805 663 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 MCMBPQ9BTE3 642 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 G6PC3Q9BUM1 346 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 SORBS1Q9BX66 1292 aaKnown RBP9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 GSX2Q9BZM3 304 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 PIGMQ9H3S5 423 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 SNX15Q9NRS6 342 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 C6orf203Q9P0P8 240 aaPredicted RBP9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 CLCF1Q9UBD9 225 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 NDRG3Q9UGV2 375 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 PHF11Q9UIL8 331 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 CHMP2BQ9UQN3 213 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 RTTNQ86VV8 2226 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 FREM3P0C091 2139 aa9.29□□□□□ -0.92
TNFAIP3-202ENST00000420009 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 C2orf92A0A1B0GVN3 265 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 SAP18O00422 153 aaKnown RBP9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 CASKO14936 926 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 OR10H2O60403 315 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 SH3BGRLO75368 114 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 STK16O75716 305 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 TNFSF13O75888 250 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 GPR75O95800 540 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 TGFB1P01137 390 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 FPR1P21462 350 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 CDC25BP30305 580 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 SERPINB1P30740 379 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 SSTR4P31391 388 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 CCKARP32238 428 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 GALNSP34059 522 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 ELK3P41970 407 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 KRTAP1-1Q07627 177 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 CHIT1Q13231 466 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 TOMM20Q15388 145 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 HIST2H2ACQ16777 129 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 DEPDC1Q5TB30 811 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 HIST2H2AA3Q6FI13 130 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 OR4C11Q6IEV9 310 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 SULT1C3Q6IMI6 304 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 TMEM81Q6P7N7 255 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 C20orf204Q6ZNR8 217 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 YRDCQ86U90 279 aaKnown RBP9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 GPR180Q86V85 440 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 GCNT2Q8N0V5 402 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 ZCCHC7Q8N3Z6 543 aaKnown RBP9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 SPC24Q8NBT2 197 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 GRK7Q8WTQ7 553 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 IGFBPL1Q8WX77 278 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 RIT1Q92963 219 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 UBE2E3Q969T4 207 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 INTS12Q96CB8 462 aaKnown RBP9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 CMTM7Q96FZ5 175 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 ACBD3Q9H3P7 528 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 PTBP2Q9UKA9 531 aaKnown RBP9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 PACSIN3Q9UKS6 424 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 TEX264Q9Y6I9 313 aa9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 RAI1Q7Z5J4 1906 aaPredicted RBP9.28□□□□□ -0.92
TNFAIP3-202ENST00000420009 MXRA5Q9NR99 2828 aa9.27□□□□□ -0.92
TNFAIP3-202ENST00000420009 EXPH5Q8NEV8 1989 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 WASHC1A8K0Z3 465 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 H0Y3Z8 333 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 PGRMC1O00264 195 aaKnown RBP9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 PLPP1O14494 284 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 MSTNO14793 375 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 CDH16O75309 829 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 CRLF1O75462 422 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 CNOT4O95628 575 aaKnown RBP9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 NR2F6P10588 404 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 CRYGSP22914 178 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 LOXP28300 417 aaPredicted RBP9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 TLX1P31314 330 aaPredicted RBP9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 CPOXP36551 454 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 BUD31P41223 144 aaPredicted RBP9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 MC3RP41968 323 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 DIO3P55073 304 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 EEF1A1P68104 462 aaKnown RBP9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 RPP38P78345 283 aaKnown RBP9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 PCDH1Q08174 1060 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 MGAT5Q09328 741 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 GAB1Q13480 694 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 PPP1R7Q15435 360 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 OR4D1Q15615 310 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 EEF1A1P5Q5VTE0 462 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 MRM1Q6IN84 353 aaKnown RBP9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 MED27Q6P2C8 311 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 PLXDC2Q6UX71 529 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 ANGPTL8Q6UXH0 198 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 LRRC70Q7Z2Q7 622 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 GPSM1Q86YR5 675 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 ZNF615Q8N8J6 731 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 C17orf47Q8NEP4 570 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 OR7G3Q8NG95 312 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 ADIPOR1Q96A54 375 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 CTHRC1Q96CG8 243 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 LRRC39Q96DD0 335 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 PBKQ96KB5 322 aa9.27□□□□□ -0.93
TNFAIP3-202ENST00000420009 MARK4Q96L34 752 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms