RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 C1QTNF9P0C862 333 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 GGT1P19440 569 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 SPINK2P20155 84 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 AGXTP21549 392 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 EEF1A2Q05639 463 aaKnown RBP13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 STX4Q12846 297 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 SLC13A2Q13183 592 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 SYT16Q17RD7 645 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 VMACQ2NL98 169 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 AAGABQ6PD74 315 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 DNAJC14Q6Y2X3 702 aaPredicted RBP13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 OR9A2Q8NGT5 310 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 CLIP3Q96DZ5 547 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 GIMAP5Q96F15 307 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 AURKBQ96GD4 344 aaPredicted RBP13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 RBM18Q96H35 190 aaKnown RBP13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 ALOXE3Q9BYJ1 711 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 MAT2BQ9NZL9 334 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 NDOR1Q9UHB4 597 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 KLK13Q9UKR3 277 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 SNX13Q9Y5W8 968 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 MAU2Q9Y6X3 613 aa13.35□□□□□ -0.27
SHMT1P1-201ENST00000419974 TCRBV3S1A0A5B6 114 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 DUXAA6NLW8 204 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 H0YHG0 523 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 TGFBR3LH3BV60 316 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 DLGAP3O95886 979 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 AGR2O95994 175 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 KLK3P07288 261 aaPredicted RBP13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 C8BP07358 591 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZGLP1P0C6A0 271 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 C8orf89P0DMQ9 161 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 S1PR1P21453 382 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 GPC1P35052 558 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 CHI3L1P36222 383 aaPredicted RBP13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 MAP3K8P41279 467 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 RHDQ02161 417 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 OCA2Q04671 838 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 FUT7Q11130 342 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZNF630Q2M218 657 aaPredicted RBP13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZNF750Q32MQ0 723 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 HES3Q5TGS1 186 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 PRAMEF8Q5VWM4 474 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 PRAMEF7Q5VXH5 474 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 FAM180BQ6P0A1 224 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 DHRS13Q6UX07 377 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 CCDC80Q76M96 950 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 DHFR2Q86XF0 187 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 PTOV1Q86YD1 416 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 MICU2Q8IYU8 434 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 LGI4Q8N135 537 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 OR7G1Q8NGA0 311 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 STT3BQ8TCJ2 826 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 NACC2Q96BF6 587 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 MS4A4EQ96PG1 132 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 TRIM15Q9C019 465 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 A4GALTQ9NPC4 353 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 ZCCHC3Q9NUD5 404 aaKnown RBP13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 OLAHQ9NV23 265 aa13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 PPIEQ9UNP9 301 aaKnown RBP13.34□□□□□ -0.27
SHMT1P1-201ENST00000419974 AKAP13Q12802 2813 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 A0A1W2PQ72 361 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 A0A1W2PS29 197 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 FKBP6O75344 327 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 STAMBPO95630 424 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 NTRK1P04629 796 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 UMPSP11172 480 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 EFNA1P20827 205 aaPredicted RBP13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 PCGF2P35227 344 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 MAN2A2P49641 1150 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 OR4D2P58180 307 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 BTG2P78543 158 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 FLOT2Q14254 428 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 MYBPC3Q14896 1274 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 KPNB1Q14974 876 aaKnown RBP13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 ELAVL1Q15717 326 aaKnown RBP13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 NKG7Q16617 165 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 TMEM107Q6UX40 140 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 TMPRSS7Q7RTY8 843 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 RNF130Q86XS8 419 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 OR4N5Q8IXE1 308 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 ZZZ3Q8IYH5 903 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 SHISA5Q8N114 240 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 EID3Q8N140 333 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 C10orf111Q8N326 155 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 RNF148Q8N7C7 305 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 C11orf65Q8NCR3 313 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 NUP43Q8NFH3 380 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 OR7G2Q8NG99 324 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 RIT1Q92963 219 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 CCDC124Q96CT7 223 aaKnown RBP13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 DGAT2Q96PD7 388 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 ADAP2Q9NPF8 381 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 NECTIN3Q9NQS3 549 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 RYDENQ9NUL5 291 aaKnown RBP13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 SNX8Q9Y5X2 465 aa13.33□□□□□ -0.28
SHMT1P1-201ENST00000419974 ARPC2O15144 300 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 OR10H2O60403 315 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 COQ9O75208 318 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms