RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 KLHDC2Q9Y2U9 406 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 ATG4BQ9Y4P1 393 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 FAM205AQ6ZU69 1335 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 A0A0A6YYD4 124 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 IGHV3-35A0A0C4DH35 117 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 LY6G6DO95868 133 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 UGT1A6P19224 532 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 CALML3P27482 149 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 MAT2AP31153 395 aaKnown RBP3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 MEOX2P50222 304 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 ARHGDIAP52565 204 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 EXOSC7Q15024 291 aaKnown RBP3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 CNPY1Q3B7I2 92 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 TCHHL1Q5QJ38 904 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 RTL6Q6ICC9 239 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 KRTAP5-4Q6L8H1 288 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 CDC42EP5Q6NZY7 148 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 GCNT7Q6ZNI0 430 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZSCAN30Q86W11 494 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 CCDC170Q8IYT3 715 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 LINC00518Q8N0U6 118 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 SLC34A3Q8N130 599 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 SIGLEC12Q96PQ1 595 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 TEX13BQ9BXU2 312 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 SLC5A7Q9GZV3 580 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 IKZF5Q9H5V7 419 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 CWC25Q9NXE8 425 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 TRPC4Q9UBN4 977 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 PRODH2Q9UF12 536 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 FBXW2Q9UKT8 454 aa3.17□□□□□ -1.9
HMGB1P49-201ENST00000418882 BICDL2A1A5D9 508 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 FRG2CA6NGY1 282 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 SLC28A1O00337 649 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 WNT2P09544 360 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 SLC35E2P0CK97 266 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 MBL2P11226 248 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 LAMP1P11279 417 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 GDF1P27539 372 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 LYZP61626 148 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZNF33BQ06732 778 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 KRT31Q15323 416 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 FUT11Q495W5 492 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 SLC22A16Q86VW1 577 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 LPCAT1Q8NF37 534 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 P3H4Q92791 437 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 NUS1Q96E22 293 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 NAP1L5Q96NT1 182 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZIM3Q96PE6 472 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 CCT8L2Q96SF2 557 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 SPAG8Q99932 426 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 PAXXQ9BUH6 204 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 AKIRIN1Q9H9L7 192 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 NRN1Q9NPD7 142 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZNF275Q9NSD4 429 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZCCHC3Q9NUD5 404 aaKnown RBP3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 ACOXLQ9NUZ1 547 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 MAD2L2Q9UI95 211 aa3.16□□□□□ -1.9
HMGB1P49-201ENST00000418882 LRRD1A4D1F6 860 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 GOT2P00505 430 aaKnown RBP3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 FCARP24071 287 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 ATP5DP30049 168 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 IL2RGP31785 369 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 STIP1P31948 543 aaKnown RBP3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 NDST1P52848 882 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 HAND2P61296 217 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF85Q03923 595 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 PDE7AQ13946 482 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 SLC10A1Q14973 349 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 TRADDQ15628 312 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 ZNF79Q15937 498 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 GSG1Q2KHT4 349 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 HKDC1Q2TB90 917 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 IYDQ6PHW0 289 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 APOOLQ6UXV4 268 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 ARL14Q8N4G2 192 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 CHCHD4Q8N4Q1 142 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 Q8N7P7 452 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 VN1R17PQ8TDU5 208 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 RSPH1Q8WYR4 309 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 SNX21Q969T3 373 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 RAB39BQ96DA2 213 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 VSIG2Q96IQ7 327 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 RPGRIP1Q96KN7 1286 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 GPR137Q96N19 417 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 PRAM1Q96QH2 718 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 IL17CQ9P0M4 197 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 EMCNQ9ULC0 261 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 MOKQ9UQ07 419 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 RPH3AQ9Y2J0 694 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 AFF2P51816 1311 aa3.15□□□□□ -1.91
HMGB1P49-201ENST00000418882 NPC1L1Q9UHC9 1359 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 A0A1W2PRV1 198 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 TRABD2BA6NFA1 517 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 HAT1O14929 419 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 MMP10P09238 476 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 IDSP22304 550 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 PITPNBP48739 271 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 SLC25A1P53007 311 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 SLC12A3P55017 1021 aa3.14□□□□□ -1.91
HMGB1P49-201ENST00000418882 KIAA1024LP59773 190 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms