RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 FOXO6A8MYZ6 492 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 CLPSP04118 112 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 GSTA1P08263 222 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 CELA3AP09093 270 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 PORP16435 677 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-208ENST00000417285 ATP5F1P24539 256 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-208ENST00000417285 MAPK12P53778 367 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 RASA2Q15283 850 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 ZNF678Q5SXM1 525 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 COMMD6Q7Z4G1 85 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 CCDC71Q8IV32 467 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-208ENST00000417285 SLC22A9Q8IVM8 553 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 RPRMLQ8N4K4 120 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 ZNF441Q8N8Z8 693 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 SECISBP2Q96T21 854 aaKnown RBP23.3■■□□□ 1.32
VEGFA-208ENST00000417285 TTYH2Q9BSA4 534 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 PROK2Q9HC23 129 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 B4GALT7Q9UBV7 327 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 PSME2Q9UL46 239 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 PCDHGB3Q9Y5G1 929 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 LIPGQ9Y5X9 500 aa23.3■■□□□ 1.32
VEGFA-208ENST00000417285 FAM47E-STBD1D6RA91 191 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 DLX3O60479 287 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 TOXO94900 526 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 OR4F21O95013 312 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 CPMP14384 443 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 TMED10P49755 219 aaKnown RBP23.29■■□□□ 1.32
VEGFA-208ENST00000417285 NRG3P56975 720 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 UNC50Q53HI1 259 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 PRAMEF20Q5VT98 475 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 ZNF615Q8N8J6 731 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 EIF1ADQ8N9N8 165 aaKnown RBP23.29■■□□□ 1.32
VEGFA-208ENST00000417285 C17orf47Q8NEP4 570 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 OR10Q1Q8NGQ4 319 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 TMEM237Q96Q45 408 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 ZNF382Q96SR6 550 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 DOHHQ9BU89 302 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 OR10A5Q9H207 317 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 ZNF703Q9H7S9 590 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-208ENST00000417285 ZNF225Q9UK10 706 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 CNOT11Q9UKZ1 510 aaKnown RBP23.29■■□□□ 1.32
VEGFA-208ENST00000417285 STK38LQ9Y2H1 464 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 PCDHA9Q9Y5H5 950 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 NPFFR2Q9Y5X5 522 aa23.29■■□□□ 1.32
VEGFA-208ENST00000417285 TEP1Q99973 2627 aaKnown RBP23.28■■□□□ 1.32
VEGFA-208ENST00000417285 C1orf226A1L170 272 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 GOLGA6L10A6NI86 522 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 GOLGA8RI6L899 631 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 SNX4O95219 450 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 KRT6AP02538 564 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 KRT6BP04259 564 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 GABRA1P14867 456 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 IGFBP2P18065 325 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 IMPDH1P20839 514 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 SSTR4P31391 388 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 DEKP35659 375 aaKnown RBP23.28■■□□□ 1.32
VEGFA-208ENST00000417285 KRT6CP48668 564 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 RPP38P78345 283 aaKnown RBP23.28■■□□□ 1.32
VEGFA-208ENST00000417285 TMEM198Q66K66 360 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 GSPT2Q8IYD1 628 aaKnown RBP23.28■■□□□ 1.32
VEGFA-208ENST00000417285 CDYL2Q8N8U2 506 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 DIO2Q92813 273 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 UCK2Q9BZX2 261 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 EPB41L4BQ9H329 900 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 SLC24A3Q9HC58 644 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 TBK1Q9UHD2 729 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 CFL2Q9Y281 166 aa23.28■■□□□ 1.32
VEGFA-208ENST00000417285 RFPL3SP0C7P2 107 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 GLI4P10075 376 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 PYGBP11216 843 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 HSD3B1P14060 373 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 HSD3B2P26439 372 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 TRA2BP62995 288 aaKnown RBP23.27■■□□□ 1.32
VEGFA-208ENST00000417285 GALNT1Q10472 559 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-208ENST00000417285 RPS6KA2Q15349 733 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 SLC48A1Q6P1K1 146 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 GPRIN3Q6ZVF9 776 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 ADIPOR1Q96A54 375 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 JSRP1Q96MG2 331 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-208ENST00000417285 MCCC2Q9HCC0 563 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 VPS29Q9UBQ0 182 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 DCDC2Q9UHG0 476 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 CES1P1Q9UKY3 287 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 FAM215AQ9Y5M1 114 aa23.27■■□□□ 1.32
VEGFA-208ENST00000417285 NKX2-6A6NCS4 301 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 MANBAO00462 879 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 TRIM3O75382 744 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-208ENST00000417285 CSNK2A2P19784 350 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-208ENST00000417285 NT5EP21589 574 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 HMOX2P30519 316 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 ZFP36L2P47974 494 aaKnown RBP23.26■■□□□ 1.31
VEGFA-208ENST00000417285 PRKAA2P54646 552 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 TLE4Q04727 773 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 TFF3Q07654 80 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 MAP4K2Q12851 820 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 CSTF3Q12996 717 aaKnown RBP23.26■■□□□ 1.31
VEGFA-208ENST00000417285 RTL6Q6ICC9 239 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 NEIL3Q8TAT5 605 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 TM4SF18Q96CE8 201 aa23.26■■□□□ 1.31
VEGFA-208ENST00000417285 FAIM2Q9BWQ8 316 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms