RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ADCY4Q8NFM4 1077 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 CTHRC1Q96CG8 243 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 BCAP29Q9UHQ4 241 aa21.43■■□□□ 1.02
SMARCB1-205ENST00000417137 TMEM200CA6NKL6 621 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 WWP2O00308 870 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 SDHDO14521 159 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 PDPK1O15530 556 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 OR2J2O76002 312 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 G6PDP11413 515 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 HLCSP50747 726 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 DUSP2Q05923 314 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 MGAT2Q10469 447 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 PDE7AQ13946 482 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 MPEG1Q2M385 716 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 OGFOD2Q6N063 350 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 FAM111BQ6SJ93 734 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 PRICKLE2Q7Z3G6 844 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 SPATA19Q7Z5L4 167 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 C9orf40Q8IXQ3 194 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 GPALPP1Q8IXQ4 340 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 OR9A2Q8NGT5 310 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 ZFP28Q8NHY6 868 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 ATAD3AQ9NVI7 634 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 LRFN1Q9P244 771 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 ATP6V1HQ9UI12 483 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 ZNF639Q9UID6 485 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 CSAG2Q9Y5P2 127 aa21.42■■□□□ 1.02
SMARCB1-205ENST00000417137 TNRC6AQ8NDV7 1962 aaKnown RBP21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 C2orf92A0A1B0GVN3 265 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 TTLL8A6PVC2 850 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 SCAMP2O15127 329 aaKnown RBP21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 PRAMEF2O60811 474 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 TGDSO95455 350 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 PLA2G2AP14555 144 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 S1PR1P21453 382 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 CLDN8P56748 225 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 PTGR1Q14914 329 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 OR1C1Q15619 314 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 LTB4RQ15722 352 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 ZNF628Q5EBL2 1059 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 PIGGQ5H8A4 983 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 RGS9BPQ6ZS82 235 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 SLC15A4Q8N697 577 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 ZNF615Q8N8J6 731 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 SLC22A8Q8TCC7 542 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 ASB15Q8WXK1 588 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 ZBED6CLQ96FA7 236 aaPredicted RBP21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 GAL3ST4Q96RP7 486 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 WWTR1Q9GZV5 400 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 TRIM45Q9H8W5 580 aaPredicted RBP21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 LIN28AQ9H9Z2 209 aaKnown RBP21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 SLCO1B3Q9NPD5 702 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 ANKRD10Q9NXR5 420 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 PRODH2Q9UF12 536 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 USH1CQ9Y6N9 552 aa21.41■■□□□ 1.02
SMARCB1-205ENST00000417137 CLPSP04118 112 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 CD46P15529 392 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 EPHA3P29320 983 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 EBPQ15125 230 aaKnown RBP21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 PRSS53Q2L4Q9 553 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 TRMT12Q53H54 448 aaKnown RBP21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 CPTPQ5TA50 214 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 NXNQ6DKJ4 435 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 ANKRD26P1Q6NSI1 321 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 RPUSD3Q6P087 351 aaKnown RBP21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 OPN5Q6U736 354 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 KAT2AQ92830 837 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 TP53INP1Q96A56 240 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 TMEM125Q96AQ2 219 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 C5orf34Q96MH7 638 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 AMDHD1Q96NU7 426 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 RASL10BQ96S79 203 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 GLIPR2Q9H4G4 154 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 WDR55Q9H6Y2 383 aaPredicted RBP21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 ACSS1Q9NUB1 689 aaPredicted RBP21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 PCDHGB6Q9Y5F9 930 aa21.4■■□□□ 1.02
SMARCB1-205ENST00000417137 CFAP46Q8IYW2 2715 aa21.39■■□□□ 1.02
SMARCB1-205ENST00000417137 GOLGA8QA0A0J9YX86 632 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 GOLGA8OA6NCC3 632 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 A8MVJ9 347 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 GOLGA8NF8WBI6 632 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 SLC28A2O43868 658 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 PLOD3O60568 738 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 SORBS2O94875 1100 aaKnown RBP21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 PTGER1P34995 402 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 DIO3P55073 304 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 MANFP55145 182 aaKnown RBP21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 C21orf58P58505 322 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 MRPS35P82673 323 aaKnown RBP21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 COLEC12Q5KU26 742 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 SPINK14Q6IE38 97 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 TAGAPQ8N103 731 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 Q8NA96 180 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 OR52R1Q8NGF1 315 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 CEP70Q8NHQ1 597 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 ACTRT2Q8TDY3 377 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 MAELQ96JY0 434 aaKnown RBP21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 DPY30Q9C005 99 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 HPF1Q9NWY4 346 aa21.39■■□□□ 1.01
SMARCB1-205ENST00000417137 LUZP4Q9P127 313 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms