RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 GALNT12Q8IXK2 581 aa13.57□□□□□ -0.24
RPS28-201ENST00000417088 RNASE6Q93091 150 aaKnown RBP13.57□□□□□ -0.24
RPS28-201ENST00000417088 ADIPOR1Q96A54 375 aa13.57□□□□□ -0.24
RPS28-201ENST00000417088 MRRFQ96E11 262 aaKnown RBP13.57□□□□□ -0.24
RPS28-201ENST00000417088 RILPQ96NA2 401 aa13.57□□□□□ -0.24
RPS28-201ENST00000417088 GNRHR2Q96P88 292 aa13.57□□□□□ -0.24
RPS28-201ENST00000417088 SECISBP2Q96T21 854 aaKnown RBP13.57□□□□□ -0.24
RPS28-201ENST00000417088 ANGPTL4Q9BY76 406 aa13.57□□□□□ -0.24
RPS28-201ENST00000417088 PRDM14Q9GZV8 571 aa13.57□□□□□ -0.24
RPS28-201ENST00000417088 CLEC4MQ9H2X3 399 aaPredicted RBP13.57□□□□□ -0.24
RPS28-201ENST00000417088 TEX10Q9NXF1 929 aaPredicted RBP13.57□□□□□ -0.24
RPS28-201ENST00000417088 CPSF2Q9P2I0 782 aaKnown RBP13.57□□□□□ -0.24
RPS28-201ENST00000417088 TNPO3Q9Y5L0 923 aaKnown RBP13.57□□□□□ -0.24
RPS28-201ENST00000417088 NAV3Q8IVL0 2385 aa13.57□□□□□ -0.24
RPS28-201ENST00000417088 A0A096LPK6 155 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 OR7A17O14581 309 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 SEMA3DO95025 777 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 KLHL2O95198 593 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 CLDN9O95484 217 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 HPNP05981 417 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 PIK3R1P27986 724 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 TIMP3P35625 211 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 CASP3P42574 277 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 ASCL1P50553 236 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 KRTAP21-3Q3LHN1 58 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 FLYWCH1Q4VC44 716 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 VASNQ6EMK4 673 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 METTL2BQ6P1Q9 378 aaKnown RBP13.56□□□□□ -0.24
RPS28-201ENST00000417088 TGIF2LYQ8IUE0 185 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 LACC1Q8IV20 430 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 PRR22Q8IZ63 422 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 OR4K14Q8NGD5 310 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 FAM222BQ8WU58 562 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 NTNG2Q96CW9 530 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 POM121Q96HA1 1249 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 CDK15Q96Q40 435 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 SERPINI1Q99574 410 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 RAB17Q9H0T7 212 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 OR10A5Q9H207 317 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 NOL11Q9H8H0 719 aaKnown RBP13.56□□□□□ -0.24
RPS28-201ENST00000417088 ZNF629Q9UEG4 869 aaPredicted RBP13.56□□□□□ -0.24
RPS28-201ENST00000417088 C15orf41Q9Y2V0 281 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 SLC6A5Q9Y345 797 aa13.56□□□□□ -0.24
RPS28-201ENST00000417088 MPDZO75970 2070 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 A6NNC1 897 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 IL2RAP01589 272 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 ALDOAP04075 364 aaKnown RBP13.55□□□□□ -0.24
RPS28-201ENST00000417088 KLK1P06870 262 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 CPMP14384 443 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 S1PR1P21453 382 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 NT5EP21589 574 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 MASP1P48740 699 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 TMED10P49755 219 aaKnown RBP13.55□□□□□ -0.24
RPS28-201ENST00000417088 XKP51811 444 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 ZNF136P52737 540 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 NRG3P56975 720 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 CEBPEQ15744 281 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 EIPR1Q53HC9 387 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 TECRLQ5HYJ1 363 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 NHSL2Q5HYW2 709 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 NSUN5P2Q63ZY6 315 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 KLC3Q6P597 504 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 PACS2Q86VP3 889 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 CDC20BQ86Y33 519 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 PM20D2Q8IYS1 436 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 PLD6Q8N2A8 252 aaKnown RBP13.55□□□□□ -0.24
RPS28-201ENST00000417088 PTGR2Q8N8N7 351 aaPredicted RBP13.55□□□□□ -0.24
RPS28-201ENST00000417088 CHDHQ8NE62 594 aaPredicted RBP13.55□□□□□ -0.24
RPS28-201ENST00000417088 OR52B6Q8NGF0 335 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 LRRC46Q96FV0 321 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 RMND5BQ96G75 393 aaPredicted RBP13.55□□□□□ -0.24
RPS28-201ENST00000417088 EPB41L4BQ9H329 900 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
RPS28-201ENST00000417088 CBLCQ9ULV8 474 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 PLEKHA6Q9Y2H5 1048 aa13.55□□□□□ -0.24
RPS28-201ENST00000417088 HRNRQ86YZ3 2850 aaPredicted RBP13.55□□□□□ -0.24
RPS28-201ENST00000417088 MED12Q93074 2177 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 ABCB1P08183 1280 aaPredicted RBP13.54□□□□□ -0.24
RPS28-201ENST00000417088 BMP7P18075 431 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 KLK2P20151 261 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 GPX3P22352 226 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 ABCD3P28288 659 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 TYK2P29597 1187 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 ARL1P40616 181 aaPredicted RBP13.54□□□□□ -0.24
RPS28-201ENST00000417088 SERPINB8P50452 374 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 RPP38P78345 283 aaKnown RBP13.54□□□□□ -0.24
RPS28-201ENST00000417088 DAZAP2Q15038 168 aaPredicted RBP13.54□□□□□ -0.24
RPS28-201ENST00000417088 UAP1Q16222 522 aaPredicted RBP13.54□□□□□ -0.24
RPS28-201ENST00000417088 WIPI1Q5MNZ9 446 aaPredicted RBP13.54□□□□□ -0.24
RPS28-201ENST00000417088 DCST1Q5T197 706 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 FRG2Q64ET8 278 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 TIGD3Q6B0B8 471 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 C17orf47Q8NEP4 570 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 OR7G1Q8NGA0 311 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 ATP6V1E2Q96A05 226 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 PHF21BQ96EK2 531 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 HSPBAP1Q96EW2 488 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 WDYHV1Q96HA8 205 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 TMEM41AQ96HV5 264 aa13.54□□□□□ -0.24
RPS28-201ENST00000417088 FRG2BQ96QU4 278 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms