RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF544Q6NX49 715 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 P2RY8Q86VZ1 359 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SERPINA12Q8IW75 414 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ZNF366Q8N895 744 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 TXNDC5Q8NBS9 432 aaKnown RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 OR7D4Q8NG98 312 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 TEX47Q8TBZ9 253 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 TSEN15Q8WW01 171 aaKnown RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 MYLIPQ8WY64 445 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 RSC1A1Q92681 617 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 TP53INP1Q96A56 240 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 RSPRY1Q96DX4 576 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ZFYVE19Q96K21 471 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 IL12RB2Q99665 862 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SLC30A3Q99726 388 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 VRK1Q99986 396 aaPredicted RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ZNF416Q9BWM5 594 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 LINC00597Q9H2U6 94 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 MMP27Q9H306 513 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 CATSPERBQ9H7T0 1116 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SMURF2Q9HAU4 748 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 CHRAC1Q9NRG0 131 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 GMPR2Q9P2T1 348 aaKnown RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 IL20RAQ9UHF4 553 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 FAM25AB3EWG3 89 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 FAM25CB3EWG5 89 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 FAM25GB3EWG6 89 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 CYR61O00622 381 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ARHGEF9O43307 516 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 TBL1XO60907 577 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 PRSS23O95084 383 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 JCHAINP01591 159 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 APOA1P02647 267 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 GBAP04062 536 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 RBP1P09455 135 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 CTRB1P17538 263 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 PRKACAP17612 351 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 M6PRP20645 277 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 HTR1EP28566 365 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SERPINA4P29622 427 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 PPP3CCP48454 512 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 GSK3BP49841 420 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 DGKEP52429 567 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 NKX2-5P52952 324 aaPredicted RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 MAXP61244 160 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 HYAL2Q12891 473 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 IL18R1Q13478 541 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 DPY19L1Q2PZI1 675 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ADPRMQ3LIE5 342 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 KLHL26Q53HC5 615 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 DCST1Q5T197 706 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 OTUD3Q5T2D3 398 aaPredicted RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 CTRB2Q6GPI1 263 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SYCE2Q6PIF2 218 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 Q6ZNB5 142 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 PAGE2Q7Z2X7 111 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ARMC10Q8N2F6 343 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ATPAF2Q8N5M1 289 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ACVR1CQ8NER5 493 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 OR9I1Q8NGQ6 314 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 PABPC5Q96DU9 382 aaKnown RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 SLA2Q9H6Q3 261 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 IL1RL2Q9HB29 575 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 POLE4Q9NR33 117 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 ABCB10Q9NRK6 738 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 FAM118AQ9NWS6 357 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 KLHL8Q9P2G9 620 aaPredicted RBP8.9□□□□□ -0.98
SNHG3-201ENST00000413987 CTSFQ9UBX1 484 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 WNT6Q9Y6F9 365 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 A3GALT2U3KPV4 340 aa8.9□□□□□ -0.98
SNHG3-201ENST00000413987 DBX1A6NMT0 343 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 FXYD1O00168 92 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 ADAMDEC1O15204 470 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 FGF10O15520 208 aaPredicted RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 PSMD3O43242 534 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 MRPS14O60783 128 aaKnown RBP8.89□□□□□ -0.99
SNHG3-201ENST00000413987 USP12O75317 370 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 KCNK2O95069 426 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 HTR1AP08908 422 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CALCBP10092 127 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 KCNJ5P48544 419 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 SLC7A9P82251 487 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF45Q02386 682 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 PDZK1IP1Q13113 114 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 DYRK1AQ13627 763 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CCINQ13939 588 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CDK10Q15131 360 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 IMPG1Q17R60 797 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 CCDC58Q4VC31 144 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 MPPE1Q53F39 396 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 HIKESHIQ53FT3 197 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 Q5PR19 223 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 AGAP6Q5VW22 663 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 TBPL2Q6SJ96 375 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 WDR88Q6ZMY6 472 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 TMPRSS7Q7RTY8 843 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 ZDHHC13Q8IUH4 622 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 PLD3Q8IV08 490 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 RIMKLAQ8IXN7 391 aa8.89□□□□□ -0.99
SNHG3-201ENST00000413987 DCBLD1Q8N8Z6 715 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms