RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 KBTBD12Q3ZCT8 623 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 FNDC7Q5VTL7 733 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 DGAT2L6Q6ZPD8 337 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 UBE3DQ7Z6J8 389 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 KRT78Q8N1N4 520 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 PPP1R14CQ8TAE6 165 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 SLC44A1Q8WWI5 657 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 WDYHV1Q96HA8 205 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 PDLIM5Q96HC4 596 aaKnown RBP8.73□□□□□ -1.01
RFFL-203ENST00000413582 FBXL20Q96IG2 436 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 GAL3ST4Q96RP7 486 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 CCL19Q99731 98 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 MAPKAP1Q9BPZ7 522 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 MCMBPQ9BTE3 642 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 SFXN3Q9BWM7 321 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 UGT2B28Q9BY64 529 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 WWTR1Q9GZV5 400 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 NT5DC2Q9H857 520 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 CALHM2Q9HA72 323 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 PRDM7Q9NQW5 492 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 LGALS13Q9UHV8 139 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 EIF3LQ9Y262 564 aaKnown RBP8.73□□□□□ -1.01
RFFL-203ENST00000413582 C15orf41Q9Y2V0 281 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 NPFFR2Q9Y5X5 522 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 PSAT1Q9Y617 370 aa8.73□□□□□ -1.01
RFFL-203ENST00000413582 ANKRD33BA6NCL7 494 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 ANKDD1BA6NHY2 528 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 DEFB108AA8MXU0 73 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 CDC7O00311 574 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 PRAMEF4O60810 478 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 H2AFYO75367 372 aaKnown RBP8.72□□□□□ -1.01
RFFL-203ENST00000413582 TRAPPC6AO75865 159 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 PIAS1O75925 651 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 SCELO95171 688 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 INHBAP08476 426 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 SERPINB3P29508 390 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 GDF5P43026 501 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 SLCO1A2P46721 670 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 KCNC1P48547 511 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 HNMTP50135 292 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 KRTAP1-1Q07627 177 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 EBPQ15125 230 aaKnown RBP8.72□□□□□ -1.01
RFFL-203ENST00000413582 RPS6KA2Q15349 733 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 KRT71Q3SY84 523 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 EIPR1Q53HC9 387 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 HSP90B2PQ58FF3 399 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 TNFAIP8L3Q5GJ75 292 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 TBCELQ5QJ74 424 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 CEP85LQ5SZL2 805 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 GRTP1Q5TC63 336 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 AGBL2Q5U5Z8 902 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 PRAMEF9Q5VWM5 478 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 BICRALQ6AI39 1079 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 FAM45BPQ6NSW5 357 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 LUZP2Q86TE4 346 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 FAM45AQ8TCE6 357 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 DIO2Q92813 273 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 MTBPQ96DY7 904 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 ART5Q96L15 291 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 RILPQ96NA2 401 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 DGAT2Q96PD7 388 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 KCNC2Q96PR1 638 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 F2RL3Q96RI0 385 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 CPNE1Q99829 537 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 EGFL8Q99944 293 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 PITHD1Q9GZP4 211 aaPredicted RBP8.72□□□□□ -1.01
RFFL-203ENST00000413582 TMBIM4Q9HC24 238 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 PPANQ9NQ55 473 aaKnown RBP8.72□□□□□ -1.01
RFFL-203ENST00000413582 C6orf203Q9P0P8 240 aaPredicted RBP8.72□□□□□ -1.01
RFFL-203ENST00000413582 SENP1Q9P0U3 644 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 PSMC3IPQ9P2W1 217 aaPredicted RBP8.72□□□□□ -1.01
RFFL-203ENST00000413582 CORO1CQ9ULV4 474 aaPredicted RBP8.72□□□□□ -1.01
RFFL-203ENST00000413582 OARD1Q9Y530 152 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 ACTL7BQ9Y614 415 aa8.72□□□□□ -1.01
RFFL-203ENST00000413582 IQANK1A0A1B0GTG1 560 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 CXorf49A8MYA2 514 aaPredicted RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 HMGB1P1B2RPK0 211 aaPredicted RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 POC1B-GALNT4F8VUJ3 575 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 RTCAO00442 366 aaKnown RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 CASKO14936 926 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 RGS16O15492 202 aaPredicted RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 CNOT4O95628 575 aaKnown RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 SNRPAP09012 282 aaKnown RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 CD22P20273 847 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 ATP5A1P25705 553 aaKnown RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 GCAP28676 217 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 SPRP35270 261 aaPredicted RBP8.71□□□□□ -1.02
RFFL-203ENST00000413582 GP5P40197 560 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 SLC37A1P57057 533 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 PLIN5Q00G26 463 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 TGM3Q08188 693 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 RCAN2Q14206 197 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 ACKR1Q16570 336 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 TMEM64Q6YI46 380 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 ADGRE4PQ86SQ3 457 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 CTAGE3PQ8IX95 158 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 OR4N5Q8IXE1 308 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 PHC2Q8IXK0 858 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 PPM1NQ8N819 430 aa8.71□□□□□ -1.02
RFFL-203ENST00000413582 ZNF441Q8N8Z8 693 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms