RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ZNF195O14628 629 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 LRATO95237 230 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 PCSK2P16519 638 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 MAPK1P28482 360 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 FRKP42685 505 aaPredicted RBP12.19□□□□□ -0.46
HDAC8-210ENST00000412342 ASMTP46597 345 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 MRPS35P82673 323 aaKnown RBP12.19□□□□□ -0.46
HDAC8-210ENST00000412342 EMX2Q04743 252 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 TRMT12Q53H54 448 aaKnown RBP12.19□□□□□ -0.46
HDAC8-210ENST00000412342 PIGGQ5H8A4 983 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 FHL5Q5TD97 284 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 IL23RQ5VWK5 629 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 ANKRD26P1Q6NSI1 321 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDAC8-210ENST00000412342 MAVSQ7Z434 540 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 LRRC34Q8IZ02 419 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 LIX1Q8N485 282 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 GOLGA6L1Q8N7Z2 621 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 FNDC5Q8NAU1 212 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 OR7G1Q8NGA0 311 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 OR5L2Q8NGL0 311 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 GFM2Q969S9 779 aaKnown RBP12.19□□□□□ -0.46
HDAC8-210ENST00000412342 ADIPOR1Q96A54 375 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 SNRNP40Q96DI7 357 aaKnown RBP12.19□□□□□ -0.46
HDAC8-210ENST00000412342 PPP1R36Q96LQ0 422 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 TAAR6Q96RI8 345 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 TRIM4Q9C037 500 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 BRINP2Q9C0B6 783 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDAC8-210ENST00000412342 OR10A5Q9H207 317 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 GLIPR2Q9H4G4 154 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 REEP4Q9H6H4 257 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 MIEF1Q9NQG6 463 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 PFDN4Q9NQP4 134 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDAC8-210ENST00000412342 LRFN1Q9P244 771 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 DTX4Q9Y2E6 619 aa12.19□□□□□ -0.46
HDAC8-210ENST00000412342 EML6Q6ZMW3 1958 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 HELZ2Q9BYK8 2649 aaKnown RBP12.18□□□□□ -0.46
HDAC8-210ENST00000412342 HDAC3O15379 428 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 AKAP10O43572 662 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 OR6B1O95007 311 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 PRPS2P11908 318 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 GPX3P22352 226 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 SOX3P41225 446 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 CYB561P49447 251 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 EMDP50402 254 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 SSR4P51571 173 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 C21orf58P58505 322 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 FOXK1P85037 733 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 OC90Q02509 493 aaPredicted RBP12.18□□□□□ -0.46
HDAC8-210ENST00000412342 EXOSC7Q15024 291 aaKnown RBP12.18□□□□□ -0.46
HDAC8-210ENST00000412342 INAQ16352 499 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 ZNF766Q5HY98 468 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 OGFOD2Q6N063 350 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 SLC29A4Q7RTT9 530 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 WDR75Q8IWA0 830 aaKnown RBP12.18□□□□□ -0.46
HDAC8-210ENST00000412342 RIMKLAQ8IXN7 391 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 FAM9CQ8IZT9 166 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 CISD2Q8N5K1 135 aaKnown RBP12.18□□□□□ -0.46
HDAC8-210ENST00000412342 OR7G2Q8NG99 324 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 C16orf52Q8NHV5 167 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 CPT1CQ8TCG5 803 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 NUDT8Q8WV74 236 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 ERP27Q96DN0 273 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 MTERF3Q96E29 417 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 MAELQ96JY0 434 aaKnown RBP12.18□□□□□ -0.46
HDAC8-210ENST00000412342 C7orf26Q96N11 449 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 AMDHD1Q96NU7 426 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 ANKRA2Q9H9E1 313 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 GIMAP4Q9NUV9 329 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 ASF1BQ9NVP2 202 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 MAP10Q9P2G4 905 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 MARCOQ9UEW3 520 aaPredicted RBP12.18□□□□□ -0.46
HDAC8-210ENST00000412342 ATP6V1HQ9UI12 483 aa12.18□□□□□ -0.46
HDAC8-210ENST00000412342 PRRC2CQ9Y520 2896 aaKnown RBP12.17□□□□□ -0.46
HDAC8-210ENST00000412342 UBR5O95071 2799 aaPredicted RBP12.17□□□□□ -0.46
HDAC8-210ENST00000412342 NBASA2RRP1 2371 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 PYCARD-AS1I3L0S3 204 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 ANKRD28O15084 1053 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 SCAMP2O15127 329 aaKnown RBP12.17□□□□□ -0.46
HDAC8-210ENST00000412342 NME2P1O60361 137 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 PLOD3O60568 738 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 SLC25A12O75746 678 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 PSMG1O95456 288 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 IFI6P09912 130 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 ALDOCP09972 364 aaKnown RBP12.17□□□□□ -0.46
HDAC8-210ENST00000412342 G6PDP11413 515 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 NME2P22392 152 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 MPIP34949 423 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 DIO3P55073 304 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 ZNF324BQ6AW86 544 aaPredicted RBP12.17□□□□□ -0.46
HDAC8-210ENST00000412342 SLC25A25Q6KCM7 469 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 MDGA2Q7Z553 956 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 GPALPP1Q8IXQ4 340 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 CYP4Z2PQ8N1L4 340 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 TMEM156Q8N614 296 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 KRTCAP2Q8N6L1 136 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 C17orf47Q8NEP4 570 aa12.17□□□□□ -0.46
HDAC8-210ENST00000412342 OR52R1Q8NGF1 315 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms