RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SDC1P18827 310 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 SSTR4P31391 388 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 MAP4K2Q12851 820 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 EBPQ15125 230 aaKnown RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 SMU1Q2TAY7 513 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF750Q32MQ0 723 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 RFTN2Q52LD8 501 aaPredicted RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 CES4AQ5XG92 561 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 SPINK14Q6IE38 97 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 SLC25A25Q6KCM7 469 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 CCDC116Q8IYX3 515 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 LRRC34Q8IZ02 419 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 TAGAPQ8N103 731 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 CISD2Q8N5K1 135 aaKnown RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 C17orf47Q8NEP4 570 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 ZFP28Q8NHY6 868 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 PPCDCQ96CD2 204 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 SNRNP40Q96DI7 357 aaKnown RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 MTERF3Q96E29 417 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 SCMH1Q96GD3 660 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 SIGLEC12Q96PQ1 595 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 WWTR1Q9GZV5 400 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 REEP4Q9H6H4 257 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF395Q9H8N7 513 aaPredicted RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 TIMMDC1Q9NPL8 285 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 TAS2R7Q9NYW3 318 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 MAT2BQ9NZL9 334 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 NOP53Q9NZM5 478 aaKnown RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 BCAP29Q9UHQ4 241 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 VPS4AQ9UN37 437 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 MAPRE3Q9UPY8 281 aa10.11□□□□□ -0.79
CHMP3-205ENST00000409810 KLF13Q9Y2Y9 288 aaPredicted RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 NUP214P35658 2090 aaPredicted RBP10.11□□□□□ -0.79
CHMP3-205ENST00000409810 UQCRHLA0A096LP55 91 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 TMEM200CA6NKL6 621 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 TRPC5OSA6NMA1 111 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 MYO1GB0I1T2 1018 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 KLRC4-KLRK1H3BQV0 150 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 PDPK1O15530 556 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 NME2P1O60361 137 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 TBX19O60806 448 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 COQ9O75208 318 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 SNNO75324 88 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-205ENST00000409810 NEURL1O76050 574 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 SP1P08047 785 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 CT62P0C5K7 136 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 BCKDHAP12694 445 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 NME2P22392 152 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 TACR1P25103 407 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 SOX3P41225 446 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 TMED10P49755 219 aaKnown RBP10.1□□□□□ -0.79
CHMP3-205ENST00000409810 NCBP2P52298 156 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHMP3-205ENST00000409810 NRG3P56975 720 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 PPP2R2AP63151 447 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 FOXK1P85037 733 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 MAPKAPK3Q16644 382 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 PRR30Q53SZ7 412 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF628Q5EBL2 1059 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 PIGGQ5H8A4 983 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 C6orf136Q5SQH8 315 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF468Q5VIY5 522 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-205ENST00000409810 FAM180BQ6P0A1 224 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 RTL4Q6ZR62 310 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 LIX1Q8N485 282 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 NATD1Q8N6N6 113 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 ZNF615Q8N8J6 731 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 GOLM1Q8NBJ4 401 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 GALNT11Q8NCW6 608 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 ADCY4Q8NFM4 1077 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 OR52R1Q8NGF1 315 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 OR9A2Q8NGT5 310 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 DNAJB8Q8NHS0 232 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 LRRC8CQ8TDW0 803 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 GRHL3Q8TE85 626 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 DOK4Q8TEW6 326 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 GFM2Q969S9 779 aaKnown RBP10.1□□□□□ -0.79
CHMP3-205ENST00000409810 TP53INP1Q96A56 240 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 CTHRC1Q96CG8 243 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 ZBED6CLQ96FA7 236 aaPredicted RBP10.1□□□□□ -0.79
CHMP3-205ENST00000409810 EGLN2Q96KS0 407 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 SGCZQ96LD1 299 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 C3orf30Q96M34 536 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 PRPF18Q99633 342 aaKnown RBP10.1□□□□□ -0.79
CHMP3-205ENST00000409810 C1orf50Q9BV19 199 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 NUF2Q9BZD4 464 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 C20orf27Q9GZN8 174 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 LIN28AQ9H9Z2 209 aaKnown RBP10.1□□□□□ -0.79
CHMP3-205ENST00000409810 MEAF6Q9HAF1 191 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 KLHL1Q9NR64 748 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 ASF1BQ9NVP2 202 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 SH3BP4Q9P0V3 963 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 NINQ8N4C6 2090 aa10.1□□□□□ -0.79
CHMP3-205ENST00000409810 SCAMP2O15127 329 aaKnown RBP10.09□□□□□ -0.79
CHMP3-205ENST00000409810 HDAC3O15379 428 aa10.09□□□□□ -0.79
CHMP3-205ENST00000409810 AKAP10O43572 662 aa10.09□□□□□ -0.79
CHMP3-205ENST00000409810 OR6B1O95007 311 aa10.09□□□□□ -0.79
CHMP3-205ENST00000409810 LRATO95237 230 aa10.09□□□□□ -0.79
CHMP3-205ENST00000409810 WISP1O95388 367 aa10.09□□□□□ -0.79
CHMP3-205ENST00000409810 CLPSP04118 112 aa10.09□□□□□ -0.79
CHMP3-205ENST00000409810 JUNP05412 331 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms