RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PIWIL2Q8TC59 973 aaKnown RBP20.73■□□□□ 0.91
PTCD3-203ENST00000409783 MTERF3Q96E29 417 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 UTP23Q9BRU9 249 aaKnown RBP20.73■□□□□ 0.91
PTCD3-203ENST00000409783 BRINP2Q9C0B6 783 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 OR10A5Q9H207 317 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 GIMAP4Q9NUV9 329 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.73■□□□□ 0.91
PTCD3-203ENST00000409783 ATP6V1HQ9UI12 483 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 YARS2Q9Y2Z4 477 aaKnown RBP20.73■□□□□ 0.91
PTCD3-203ENST00000409783 TRAV17A0A0B4J275 112 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 SLCO1B7G3V0H7 640 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 WWP2O00308 870 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 FCHO1O14526 889 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 ATP8B1O43520 1251 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 VPS4BO75351 444 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 NEURL1O76050 574 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 NADKO95544 446 aaPredicted RBP20.72■□□□□ 0.91
PTCD3-203ENST00000409783 G6PDP11413 515 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 MPIP34949 423 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 HLCSP50747 726 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 DIO3P55073 304 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 MRPS35P82673 323 aaKnown RBP20.72■□□□□ 0.91
PTCD3-203ENST00000409783 MAD2L1Q13257 205 aaPredicted RBP20.72■□□□□ 0.91
PTCD3-203ENST00000409783 FHL5Q5TD97 284 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 OGFOD2Q6N063 350 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 RIMKLAQ8IXN7 391 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 ZNF441Q8N8Z8 693 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 NUDT8Q8WV74 236 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 DYDC1Q8WWB3 177 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 BBS4Q96RK4 519 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 RASL10BQ96S79 203 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 WWTR1Q9GZV5 400 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.72■□□□□ 0.91
PTCD3-203ENST00000409783 GLIPR2Q9H4G4 154 aa20.72■□□□□ 0.91
PTCD3-203ENST00000409783 NOP53Q9NZM5 478 aaKnown RBP20.72■□□□□ 0.91
PTCD3-203ENST00000409783 EIF3LQ9Y262 564 aaKnown RBP20.72■□□□□ 0.91
PTCD3-203ENST00000409783 SHANK1Q9Y566 2161 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 SCAMP2O15127 329 aaKnown RBP20.71■□□□□ 0.91
PTCD3-203ENST00000409783 LBPP18428 481 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 FRKP42685 505 aaPredicted RBP20.71■□□□□ 0.91
PTCD3-203ENST00000409783 C21orf58P58505 322 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 EXOSC7Q15024 291 aaKnown RBP20.71■□□□□ 0.91
PTCD3-203ENST00000409783 OR1C1Q15619 314 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 PIGGQ5H8A4 983 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 SPINK14Q6IE38 97 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 PRICKLE2Q7Z3G6 844 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 FAM9CQ8IZT9 166 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 C16orf52Q8NHV5 167 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 KAT2AQ92830 837 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 PPCDCQ96CD2 204 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 MAELQ96JY0 434 aaKnown RBP20.71■□□□□ 0.91
PTCD3-203ENST00000409783 MAGEB18Q96M61 343 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 AMDHD1Q96NU7 426 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 WDR55Q9H6Y2 383 aaPredicted RBP20.71■□□□□ 0.91
PTCD3-203ENST00000409783 ANKRA2Q9H9E1 313 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 DTX4Q9Y2E6 619 aa20.71■□□□□ 0.91
PTCD3-203ENST00000409783 TRPC5OSA6NMA1 111 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 SLC28A2O43868 658 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 PRAMEF2O60811 474 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 ALDOCP09972 364 aaKnown RBP20.7■□□□□ 0.9
PTCD3-203ENST00000409783 EPHA3P29320 983 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 CYB561P49447 251 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 SSR4P51571 173 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 NCBP2P52298 156 aaKnown RBP eCLIP20.7■□□□□ 0.9
PTCD3-203ENST00000409783 MLLT10P55197 1068 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 PRR30Q53SZ7 412 aaPredicted RBP20.7■□□□□ 0.9
PTCD3-203ENST00000409783 C6orf163Q5TEZ5 329 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 RPUSD3Q6P087 351 aaKnown RBP20.7■□□□□ 0.9
PTCD3-203ENST00000409783 LYPD8Q6UX82 237 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 RGS9BPQ6ZS82 235 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 SLC29A4Q7RTT9 530 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 KRTCAP2Q8N6L1 136 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 OR7G2Q8NG99 324 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 OR7A2PQ8NGA2 310 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 ADIPOR1Q96A54 375 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 CIDECQ96AQ7 238 aaPredicted RBP20.7■□□□□ 0.9
PTCD3-203ENST00000409783 ERP27Q96DN0 273 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 SCMH1Q96GD3 660 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 HES7Q9BYE0 225 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 SH3BP4Q9P0V3 963 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 LRFN1Q9P244 771 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 PCDHGB6Q9Y5F9 930 aa20.7■□□□□ 0.9
PTCD3-203ENST00000409783 ANKRD28O15084 1053 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 PDPK1O15530 556 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 PLOD3O60568 738 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 OR6B1O95007 311 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 GPX3P22352 226 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 NTSP30990 170 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 SOX3P41225 446 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 EMDP50402 254 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 CLDN8P56748 225 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 OC90Q02509 493 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-203ENST00000409783 TLE1Q04724 770 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 SLC9B1Q4ZJI4 515 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 R3HCC1LQ7Z5L2 792 aaKnown RBP20.69■□□□□ 0.9
PTCD3-203ENST00000409783 ZNF605Q86T29 641 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 OR52R1Q8NGF1 315 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 GAL3ST4Q96RP7 486 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 MED4Q9NPJ6 270 aa20.69■□□□□ 0.9
PTCD3-203ENST00000409783 NTNG1Q9Y2I2 539 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms