RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 C6orf203Q9P0P8 240 aaPredicted RBP11.67□□□□□ -0.54
CHMP3-204ENST00000409727 RIMS3Q9UJD0 308 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 CDC14AQ9UNH5 594 aa11.67□□□□□ -0.54
CHMP3-204ENST00000409727 C5orf58C9J3I9 102 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 CTNSO60931 367 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 GP1BAP07359 652 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 CT62P0C5K7 136 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 UMPSP11172 480 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 GCGRP47871 477 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 KHKP50053 298 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 PDX1P52945 283 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 CLDN6P56747 220 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 CHRNB3Q05901 458 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 VEZF1Q14119 521 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 EXOSC7Q15024 291 aaKnown RBP11.66□□□□□ -0.54
CHMP3-204ENST00000409727 ZNF630Q2M218 657 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-204ENST00000409727 ZNF628Q5EBL2 1059 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 VWA2Q5GFL6 755 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 VTCN1Q7Z7D3 282 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SLC38A9Q8NBW4 561 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 ADAMTS18Q8TE60 1221 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 MOAP1Q96BY2 351 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 MVB12AQ96EY5 273 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 RBM18Q96H35 190 aaKnown RBP11.66□□□□□ -0.54
CHMP3-204ENST00000409727 CHID1Q9BWS9 393 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 UGT2B28Q9BY64 529 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 TMEM38AQ9H6F2 299 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 ADAP2Q9NPF8 381 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 ARMC1Q9NVT9 282 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 ANGPT4Q9Y264 503 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 CACNA1HO95180 2353 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SLC28A2O43868 658 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 GCM2O75603 506 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-204ENST00000409727 IFNA16P05015 189 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SLC35E2P0CK97 266 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 ARAFP10398 606 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 CCL4P13236 92 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SOX18P35713 384 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 VHLP40337 213 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 CRYBA2P53672 197 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 FOXL2P58012 376 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 EEF1A2Q05639 463 aaKnown RBP11.66□□□□□ -0.54
CHMP3-204ENST00000409727 RBBP4Q09028 425 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 DSG2Q14126 1118 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SYPL1Q16563 259 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 PRICKLE4Q2TBC4 344 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 HMBOX1Q6NT76 420 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SHISA6Q6ZSJ9 500 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 FKBP9P1Q75LS8 142 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 PPP1R3BQ86XI6 285 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 GOLM1Q8NBJ4 401 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 ICA1LQ8NDH6 482 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SLC9A6Q92581 669 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 TMEM19Q96HH6 336 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 PTCHD1Q96NR3 888 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 DGAT2Q96PD7 388 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 MS4A4EQ96PG1 132 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 PARD6AQ9NPB6 346 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 NECTIN3Q9NQS3 549 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SIDT1Q9NXL6 827 aaKnown RBP11.66□□□□□ -0.54
CHMP3-204ENST00000409727 MAT2BQ9NZL9 334 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SRPK3Q9UPE1 567 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 SAMD4AQ9UPU9 718 aaKnown RBP11.66□□□□□ -0.54
CHMP3-204ENST00000409727 KCNE3Q9Y6H6 103 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 AK5Q9Y6K8 562 aa11.66□□□□□ -0.54
CHMP3-204ENST00000409727 ASCC3Q8N3C0 2202 aaKnown RBP11.65□□□□□ -0.54
CHMP3-204ENST00000409727 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 TMEM247A6NEH6 219 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 M0QX08 132 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 HNRNPRO43390 633 aaKnown RBP11.65□□□□□ -0.54
CHMP3-204ENST00000409727 TFPTP0C1Z6 253 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 RAP2AP10114 183 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 NR2F1P10589 423 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 BMP2P12643 396 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 PGDP52209 483 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 ZFP36L1Q07352 338 aaKnown RBP11.65□□□□□ -0.54
CHMP3-204ENST00000409727 CLPPQ16740 277 aaPredicted RBP11.65□□□□□ -0.54
CHMP3-204ENST00000409727 GRAMD1BQ3KR37 738 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 CYP27C1Q4G0S4 372 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 CYBRD1Q53TN4 286 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 YOD1Q5VVQ6 348 aaPredicted RBP11.65□□□□□ -0.54
CHMP3-204ENST00000409727 ERMP1Q7Z2K6 904 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 HMGN2P46Q86SG4 172 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 OR2L13Q8N349 312 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 TMEM102Q8N9M5 508 aaPredicted RBP11.65□□□□□ -0.54
CHMP3-204ENST00000409727 SMYD1Q8NB12 490 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 AGBL5Q8NDL9 886 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 RIT1Q92963 219 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 GIMAP5Q96F15 307 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 PYURFQ96I23 114 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 HSH2DQ96JZ2 352 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 OR7D2Q96RA2 312 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 CLK4Q9HAZ1 481 aaKnown RBP11.65□□□□□ -0.54
CHMP3-204ENST00000409727 A4GALTQ9NPC4 353 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 ENAMQ9NRM1 1142 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 LANCL2Q9NS86 450 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 PTGFRNQ9P2B2 879 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 P2RX2Q9UBL9 471 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 CTSFQ9UBX1 484 aa11.65□□□□□ -0.54
CHMP3-204ENST00000409727 RPS6KA6Q9UK32 745 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms