RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SLC15A3Q8IY34 581 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 OR9A4Q8NGU2 314 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 UBTD2Q8WUN7 234 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 SLCO4A1Q96BD0 722 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 ZNF354BQ96LW1 612 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 MACROD1Q9BQ69 325 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 ARMC1Q9NVT9 282 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 SPATA7Q9P0W8 599 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 KLHL42Q9P2K6 505 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 TAC3Q9UHF0 121 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 LEF1Q9UJU2 399 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 OARD1Q9Y530 152 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 ASB1Q9Y576 335 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 TIMM22Q9Y584 194 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 PCDHGB6Q9Y5F9 930 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 HRH3Q9Y5N1 445 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 SPG11Q96JI7 2443 aa11.88□□□□□ -0.51
CHRNA1-205ENST00000409542 FAM234BA2RU67 622 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 HAT1O14929 419 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 ASNA1O43681 348 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 OR4F21O95013 312 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 NPPAP01160 153 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 ATP6V1B2P21281 511 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 ZFP36L2P47974 494 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 DIO3P55073 304 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 NME5P56597 212 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 TSTA3Q13630 321 aaPredicted RBP11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 GBX1Q14549 363 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 ZNF468Q5VIY5 522 aaPredicted RBP11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 GARNL3Q5VVW2 1013 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 GOLGA7Q7Z5G4 137 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 ANKRD37Q7Z713 158 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 MYO1HQ8N1T3 1032 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 RAB42Q8N4Z0 105 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 ANKFN1Q8N957 763 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 OR9A1PQ8NGU1 263 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 SDCCAG3Q96C92 435 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 LRRC58Q96CX6 371 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 CCDC138Q96M89 665 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 PKP4Q99569 1192 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 CENPKQ9BS16 269 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 YIPF3Q9GZM5 350 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 CMTM6Q9NX76 183 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 TEKT2Q9UIF3 430 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 PTBP2Q9UKA9 531 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 PCDHA9Q9Y5H5 950 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 AP4B1Q9Y6B7 739 aa11.87□□□□□ -0.51
CHRNA1-205ENST00000409542 NAV3Q8IVL0 2385 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 SLC22A3O75751 556 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 NEURL1O76050 574 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 OTCP00480 354 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 ABOP16442 354 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 ZNF26P17031 533 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 HOXB4P17483 251 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 SLC6A2P23975 617 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 PRDX1Q06830 199 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 GTF2H2Q13888 395 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 SMU1Q2TAY7 513 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 ATP6AP1LQ52LC2 224 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 FBXO48Q5FWF7 155 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 C6orf136Q5SQH8 315 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 MFSD4BQ5TF39 518 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 RNF220Q5VTB9 566 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 FOXB2Q5VYV0 432 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 GTF2H2CQ6P1K8 395 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 OR2T11Q8NH01 316 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 METTL21AQ8WXB1 218 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 NRGNQ92686 78 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 TMEM125Q96AQ2 219 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 ZNF597Q96LX8 424 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 SLC39A3Q9BRY0 314 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 CCM2LQ9NUG4 571 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 ACTR3BQ9P1U1 418 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 HCN3Q9P1Z3 774 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 HCFC1P51610 2035 aa11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 MAP1AP78559 2803 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-205ENST00000409542 PRRC2AP48634 2157 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 CCDC154A6NI56 674 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 GABRR3A8MPY1 467 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 OR7A17O14581 309 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 SP1P08047 785 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 BMP2P12643 396 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 PTGER1P34995 402 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 POLR2JP52435 117 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 EEFSECP57772 596 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 EMX2Q04743 252 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 NFYCQ13952 458 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 FAM53BQ14153 422 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 MEP1AQ16819 746 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 MINDY4Q4G0A6 757 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 LIN52Q52LA3 116 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 CDKL4Q5MAI5 379 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 SULT1C3Q6IMI6 304 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 LETMD1Q6P1Q0 360 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 ZNF227Q86WZ6 799 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 PACRGLQ8N7B6 248 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 CDYL2Q8N8U2 506 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 OR52B6Q8NGF0 335 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 OR51Q1Q8NH59 317 aa11.85□□□□□ -0.51
CHRNA1-205ENST00000409542 PHF10Q8WUB8 498 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms