RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TBX19O60806 448 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 NEURL1O76050 574 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 LRATO95237 230 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 SOX18P35713 384 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 PDE7AQ13946 482 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 LTB4RQ15722 352 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 INPP5JQ15735 1006 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 ZNF628Q5EBL2 1059 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 SPINK14Q6IE38 97 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 FAM111BQ6SJ93 734 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 LRRC34Q8IZ02 419 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 LIX1Q8N485 282 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 OR9A2Q8NGT5 310 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 LRRC8CQ8TDW0 803 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 MTERF3Q96E29 417 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 SIGLEC12Q96PQ1 595 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 RASL10BQ96S79 203 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 OR10A5Q9H207 317 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 ASIC5Q9NY37 505 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 MARCOQ9UEW3 520 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 EIF3LQ9Y262 564 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 PCDHGB6Q9Y5F9 930 aa18.39■□□□□ 0.54
PDLIM2-207ENST00000409417 SPENQ96T58 3664 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 TRPC5OSA6NMA1 111 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 NTSP30990 170 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 PTGER1P34995 402 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 PTGR1Q14914 329 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 EBPQ15125 230 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 PIGGQ5H8A4 983 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 ZNF766Q5HY98 468 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 RPUSD3Q6P087 351 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 R3HCC1LQ7Z5L2 792 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 CPT1CQ8TCG5 803 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 DYDC1Q8WWB3 177 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 PPCDCQ96CD2 204 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 C7orf26Q96N11 449 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 WWTR1Q9GZV5 400 aa18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 NOP53Q9NZM5 478 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-207ENST00000409417 MYO18BQ8IUG5 2567 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 C2orf92A0A1B0GVN3 265 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 KITP10721 976 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 PLA2G2AP14555 144 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 CD46P15529 392 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 PCSK2P16519 638 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 NCBP2P52298 156 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 MRPS35P82673 323 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 TRMT12Q53H54 448 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 WDR75Q8IWA0 830 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 GPALPP1Q8IXQ4 340 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 FAM9CQ8IZT9 166 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 CISD2Q8N5K1 135 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 C16orf52Q8NHV5 167 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 PIWIL2Q8TC59 973 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 ASB15Q8WXK1 588 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 C5orf34Q96MH7 638 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 GAL3ST4Q96RP7 486 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 RYDENQ9NUL5 291 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 SH3BP4Q9P0V3 963 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 CFL2Q9Y281 166 aa18.38■□□□□ 0.53
PDLIM2-207ENST00000409417 PLOD3O60568 738 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 SLC25A12O75746 678 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 SLITRK5O94991 958 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 CBX7O95931 251 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 G6PDP11413 515 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 DDX5P17844 614 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 PRPS1L1P21108 318 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 HPCAL1P37235 193 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 RPL3P39023 403 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 SOX3P41225 446 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 EXOSC7Q15024 291 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 INAQ16352 499 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 PRR30Q53SZ7 412 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 ANKRD26P1Q6NSI1 321 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 LARP4Q71RC2 724 aaKnown RBP eCLIP18.37■□□□□ 0.536e-7■■□□□ 13.2
PDLIM2-207ENST00000409417 ZNF227Q86WZ6 799 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 SLC15A4Q8N697 577 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 ZNF441Q8N8Z8 693 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 C17orf47Q8NEP4 570 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 KAT2AQ92830 837 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 TP53INP1Q96A56 240 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 SNRNP40Q96DI7 357 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 SCMH1Q96GD3 660 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 AMDHD1Q96NU7 426 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 GLIPR2Q9H4G4 154 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 BCAP29Q9UHQ4 241 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 ATP6V1HQ9UI12 483 aa18.37■□□□□ 0.53
PDLIM2-207ENST00000409417 A8MVJ9 347 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 SDHDO14521 159 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 SCAMP2O15127 329 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 PDPK1O15530 556 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 ZNF354AO60765 605 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 BCAS2O75934 225 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 OR6B1O95007 311 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 LBPP18428 481 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 DUSP8Q13202 625 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 HLA-DQA1Q5Y7H0 255 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 SLC25A25Q6KCM7 469 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 OGFOD2Q6N063 350 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 OPN5Q6U736 354 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 CYP4Z2PQ8N1L4 340 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms