RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 PI15O43692 258 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 PEPDP12955 493 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 CHMP24386 653 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 INPP1P49441 399 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 TAS2R41P59536 307 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 SLAMF1Q13291 335 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 HENMT1Q5T8I9 393 aaKnown RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 HSDL2Q6YN16 418 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 METTL3Q86U44 580 aaKnown RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 REPS1Q96D71 796 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 BTBD2Q9BX70 525 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 OR51V1Q9H2C8 321 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 MRPS30Q9NP92 439 aaKnown RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 IL23AQ9NPF7 189 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 DMRT3Q9NQL9 472 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 STOML2Q9UJZ1 356 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 PCDHGA2Q9Y5H1 932 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 SCN8AQ9UQD0 1980 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 C1orf226A1L170 272 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 PRAMEF25A6NGN4 478 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 SAGE2PA6NJ88 616 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 LDB3O75112 727 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 UGT2B17O75795 530 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 MRPL3P09001 348 aaKnown RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 ZNF30P17039 623 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 PPP2R1BP30154 601 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 GPR4P46093 362 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 PDGFRLQ15198 375 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 DCST1Q5T197 706 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 SDE2Q6IQ49 451 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 KIAA1211LQ6NV74 962 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 FIGNL1Q6PIW4 674 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 TSEN54Q7Z6J9 526 aaKnown RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 SIMC1Q8NDZ2 872 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 SUN5Q8TC36 379 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 PITX2Q99697 317 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 ASPNQ9BXN1 380 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 SPHK1Q9NYA1 384 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 TTC28Q96AY4 2481 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 POM121BA6NF01 834 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 SLC16A5O15375 505 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 CXCL10P02778 98 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 ENDOUP21128 410 aaKnown RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 MAOBP27338 520 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 UGT2B15P54855 530 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 CSNK2BP67870 215 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 ERV3-1Q14264 604 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 ELAVL3Q14576 367 aaKnown RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 CRB2Q5IJ48 1285 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 CDKL4Q5MAI5 379 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 VASH1Q7L8A9 365 aaPredicted RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 ZNF547Q8IVP9 402 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 OXR1Q8N573 874 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 NLGN4YQ8NFZ3 816 aaPredicted RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 OR52N2Q8NGI0 321 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 CHTF18Q8WVB6 975 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 ITPKCQ96DU7 683 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 BCL7BQ9BQE9 202 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 CCDC3Q9BQI4 270 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 WFDC6Q9BQY6 131 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 PBX4Q9BYU1 374 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 POLR2J2Q9GZM3 115 aaKnown RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 MKRN2Q9H000 416 aaKnown RBP12.68□□□□□ -0.38
COL6A2-204ENST00000409416 OR51I1Q9H343 314 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 PADI2Q9Y2J8 665 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 PEX16Q9Y5Y5 336 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 CLCA3PQ9Y6N3 262 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 STON1Q9Y6Q2 735 aa12.68□□□□□ -0.38
COL6A2-204ENST00000409416 AGAP14A8MT82 685 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 H0YIV9 168 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 TLR4O00206 839 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 ARHGAP33O14559 1287 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 MYL12BO14950 172 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 MOSPD3O75425 235 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 SLC15A1P46059 708 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 OR2B6P58173 313 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 FADDQ13158 208 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 SLC9A5Q14940 896 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 TOR1AIP1Q5JTV8 583 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 NDUFAF5Q5TEU4 345 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 FAM46CQ5VWP2 391 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 RAB42Q8N4Z0 105 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 ZG16BQ96DA0 208 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 TRNT1Q96Q11 434 aaKnown RBP12.67□□□□□ -0.38
COL6A2-204ENST00000409416 MCCC1Q96RQ3 725 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-204ENST00000409416 LYSMD1Q96S90 227 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 GABARAPL3Q9BY60 117 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 TPSD1Q9BZJ3 242 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 WSB2Q9NYS7 404 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-204ENST00000409416 LATS1O95835 1130 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 GKN3PP0CG01 181 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 FUT1P19526 365 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 NT5EP21589 574 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 CENPAP49450 140 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 PGDP52209 483 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 CRISP1P54107 249 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 PRSS53Q2L4Q9 553 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 ZMAT1Q5H9K5 638 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 ZDHHC20Q5W0Z9 365 aa12.67□□□□□ -0.38
COL6A2-204ENST00000409416 RNF44Q7L0R7 432 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms