RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LRRC8DQ7L1W4 858 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SLC46A3Q7Z3Q1 461 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SPATA19Q7Z5L4 167 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 MRPL10Q7Z7H8 261 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 ZC3HC1Q86WB0 502 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 HMGCLL1Q8TB92 370 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TEX47Q8TBZ9 253 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ST8SIA4Q92187 359 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SMG7Q92540 1137 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 RBPMSQ93062 196 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 MARC2Q969Z3 335 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 FUBP1Q96AE4 644 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 PTERQ96BW5 349 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 C19orf60Q96EN9 201 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 CPB2Q96IY4 423 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 VPS39Q96JC1 886 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ARL5BQ96KC2 179 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 CCDC17Q96LX7 622 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 UROC1Q96N76 676 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 FYTTD1Q96QD9 318 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 WACQ9BTA9 647 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PI4K2AQ9BTU6 479 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 KATNAL1Q9BW62 490 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TPSD1Q9BZJ3 242 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 GABARAPL1Q9H0R8 117 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PIGUQ9H490 435 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 POMKQ9H5K3 350 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 CATSPERBQ9H7T0 1116 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 CAB39LQ9H9S4 337 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 CYP3A43Q9HB55 503 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 FOLH1BQ9HBA9 442 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ZBTB20Q9HC78 741 aaPredicted RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 LYARQ9NX58 379 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 ERVK-18Q9QC07 812 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 DKK2Q9UBU2 259 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 DUX4Q9UBX2 424 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 NUFIP1Q9UHK0 495 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 KIF25Q9UIL4 384 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 BTRCQ9Y297 605 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ACOT9Q9Y305 439 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 U3KQ87 197 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 FBN2P35556 2912 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 NRCAMQ92823 1304 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 A0A1W2PP18 115 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PQLC2LA1A4F0 135 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TMEM200CA6NKL6 621 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 C2orf81A6NN90 581 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TARM1B6A8C7 271 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TISP43B9A030 160 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 FXYD1O00168 92 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 UPK1AO00322 258 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ABCD4O14678 606 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 MYL12BO14950 172 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 MDM4O15151 490 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 HS6ST1O60243 411 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 HCN1O60741 890 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 EEDO75530 441 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 PGLSO95336 258 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 CST1P01037 141 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 HSD3B1P14060 373 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 HGFP14210 728 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 NCF1P14598 390 aaPredicted RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 NPPBP16860 134 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 IL1RNP18510 177 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 MYL12AP19105 171 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 MAGP20916 626 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 RPS3P23396 243 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLK1-202ENST00000409403 IGFBP5P24593 272 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 NUP62P37198 522 aaPredicted RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 RARRES1P49788 294 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PGDP52209 483 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 HSF2Q03933 536 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 GRB14Q14449 540 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ZNF169Q14929 603 aaPredicted RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 TIGD6Q17RP2 521 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 FAM83EQ2M2I3 478 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PDZK1Q5T2W1 519 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 LCN1P1Q5VSP4 162 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ARHGAP17Q68EM7 881 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 GPR139Q6DWJ6 353 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PM20D1Q6GTS8 502 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TBPL2Q6SJ96 375 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 GDPGP1Q6ZNW5 385 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SLC26A9Q7LBE3 791 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ZNF367Q7RTV3 350 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 GALNT10Q86SR1 603 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ASPGQ86U10 573 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 CUZD1Q86UP6 607 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 STX12Q86Y82 276 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 P3H2Q8IVL5 708 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 FSTL5Q8N475 847 aaPredicted RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 C1orf52Q8N6N3 182 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 ZBTB44Q8NCP5 570 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 B3GALNT2Q8NCR0 500 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TMEM161BQ8NDZ6 487 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ZNF680Q8NEM1 530 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 OR4M2Q8NGB6 313 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 OR4M1Q8NGD0 313 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SGK3Q96BR1 496 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TBC1D20Q96BZ9 403 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms