RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TMEM35AQ53FP2 167 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 PAGE2BQ5JRK9 111 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 PLEKHM3Q6ZWE6 761 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 ZNF550Q7Z398 422 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 GPR180Q86V85 440 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 MED12LQ86YW9 2145 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 GRAMD2AQ8IUY3 354 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 RDH11Q8TC12 318 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 TMEM158Q8WZ71 300 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 TP53INP1Q96A56 240 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 WDR34Q96EX3 536 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 CFAP36Q96G28 342 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 UCN2Q96RP3 112 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 PELOQ9BRX2 385 aaKnown RBP15.15■□□□□ 0.02
CHMP3-203ENST00000409225 G6PC3Q9BUM1 346 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 METTL7AQ9H8H3 244 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 MS4A12Q9NXJ0 267 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 FETUBQ9UGM5 382 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 RAI1Q7Z5J4 1906 aaPredicted RBP15.14■□□□□ 0.01
CHMP3-203ENST00000409225 C2orf72A6NCS6 295 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 GLOD5A6NK44 160 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 GPR75O95800 540 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 TLX1P31314 330 aaPredicted RBP15.14■□□□□ 0.01
CHMP3-203ENST00000409225 CD79BP40259 229 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 STARP49675 285 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 HNRNPH2P55795 449 aaKnown RBP15.14■□□□□ 0.01
CHMP3-203ENST00000409225 NRG3P56975 720 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 EEF1A1P68104 462 aaKnown RBP15.14■□□□□ 0.01
CHMP3-203ENST00000409225 IRF8Q02556 426 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 CHIT1Q13231 466 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 PDK4Q16654 411 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 RNASEH2BQ5TBB1 312 aaKnown RBP15.14■□□□□ 0.01
CHMP3-203ENST00000409225 EEF1A1P5Q5VTE0 462 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 OR4C11Q6IEV9 310 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 HEPHL1Q6MZM0 1159 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 TRMT10BQ6PF06 316 aaKnown RBP15.14■□□□□ 0.01
CHMP3-203ENST00000409225 ENPP6Q6UWR7 440 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 TRIM42Q8IWZ5 723 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 MEIOBQ8N635 442 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 OR14L1PQ8NHC6 308 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 TMEM171Q8WVE6 324 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 UCN3Q969E3 161 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 OR51B5Q9H339 312 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 CNOT10Q9H9A5 744 aaKnown RBP15.14■□□□□ 0.01
CHMP3-203ENST00000409225 PLAC1Q9HBJ0 212 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 SERHLQ9NQF3 203 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 PHF11Q9UIL8 331 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 MAPRE3Q9UPY8 281 aa15.14■□□□□ 0.01
CHMP3-203ENST00000409225 FAM95CA0A1B0GW59 222 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 STK16O75716 305 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 KRT15P19012 456 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 LOXP28300 417 aaPredicted RBP15.13■□□□□ 0.01
CHMP3-203ENST00000409225 CCKARP32238 428 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 RAP1GDS1P52306 607 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 ATP5J2P56134 94 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 TAS2R39P59534 338 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 CAPRIN1Q14444 709 aaKnown RBP15.13■□□□□ 0.01
CHMP3-203ENST00000409225 HP1BP3Q5SSJ5 553 aaPredicted RBP15.13■□□□□ 0.01
CHMP3-203ENST00000409225 C10orf62Q5T681 223 aaPredicted RBP15.13■□□□□ 0.01
CHMP3-203ENST00000409225 KHDRBS2Q5VWX1 349 aaKnown RBP15.13■□□□□ 0.01
CHMP3-203ENST00000409225 VWA1Q6PCB0 445 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 CCDC137Q6PK04 289 aaKnown RBP15.13■□□□□ 0.01
CHMP3-203ENST00000409225 TCAIMQ8N3R3 496 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 RNF175Q8N4F7 328 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 CNEP1R1Q8N9A8 125 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 STARD4Q96DR4 205 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 MARK4Q96L34 752 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 NAT9Q9BTE0 207 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 RBSNQ9H1K0 784 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 OPN3Q9H1Y3 402 aaPredicted RBP15.13■□□□□ 0.01
CHMP3-203ENST00000409225 PSAT1Q9Y617 370 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 USF3Q68DE3 2245 aa15.13■□□□□ 0.01
CHMP3-203ENST00000409225 HEATR5AQ86XA9 2040 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 RNF223E7ERA6 249 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 PLOD2O00469 737 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 CCNT2O60583 730 aaKnown RBP15.12■□□□□ 0.01
CHMP3-203ENST00000409225 TGM6O95932 706 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 POU2F1P14859 743 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 CHMP24386 653 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 GGT5P36269 586 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 UGT2B10P36537 528 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 BUD31P41223 144 aaPredicted RBP15.12■□□□□ 0.01
CHMP3-203ENST00000409225 RPS13P62277 151 aaKnown RBP15.12■□□□□ 0.01
CHMP3-203ENST00000409225 DESI1Q6ICB0 168 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 ZNF474Q6S9Z5 364 aaPredicted RBP15.12■□□□□ 0.01
CHMP3-203ENST00000409225 SCIMPQ6UWF3 145 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 P4HA3Q7Z4N8 544 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 SPATA6LQ8N4H0 392 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 IGFBPL1Q8WX77 278 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 CMTM7Q96FZ5 175 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 PGM2Q96G03 612 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 OR2B2Q9GZK3 357 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 CXorf56Q9H5V9 222 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 GALNT9Q9HCQ5 603 aa15.12■□□□□ 0.01
CHMP3-203ENST00000409225 A0A087X1B8 175 aa15.11■□□□□ 0.01
CHMP3-203ENST00000409225 A0A1W2PS29 197 aa15.11■□□□□ 0.01
CHMP3-203ENST00000409225 CDH16O75309 829 aa15.11■□□□□ 0.01
CHMP3-203ENST00000409225 TP53P04637 393 aaPredicted RBP15.11■□□□□ 0.01
CHMP3-203ENST00000409225 ABCB1P08183 1280 aaPredicted RBP15.11■□□□□ 0.01
CHMP3-203ENST00000409225 PAX1P15863 534 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms